[MIRROR] [MDB IGNORE] BIDDLE TRAITORS - Adds progression traitors. Refactors uplink code in its entirety [MDB IGNORE] (#10620)

* [MDB IGNORE] BIDDLE TRAITORS - Adds progression traitors. Refactors uplink code in its entirety

* updates and fixes

* ffff

Co-authored-by: Watermelon914 <37270891+Watermelon914@users.noreply.github.com>
Co-authored-by: Gandalf <9026500+Gandalf2k15@users.noreply.github.com>

code/modules/mapping/map_template.dm

@@ -44,6 +44,7 @@
 	var/list/obj/machinery/atmospherics/atmos_machines = list()
 	var/list/obj/structure/cable/cables = list()
 	var/list/atom/movable/movables = list()
+	var/list/obj/docking_port/stationary/ports = list()
 	var/list/area/areas = list()
 
 	var/list/turfs = block(
@@ -71,6 +72,8 @@
 				continue
 			if(istype(movable_in_turf, /obj/machinery/atmospherics))
 				atmos_machines += movable_in_turf
+			if(istype(movable_in_turf, /obj/docking_port/stationary))
+				ports += movable_in_turf
 
 	// Not sure if there is some importance here to make sure the area is in z
 	// first or not.  Its defined In Initialize yet its run first in templates
@@ -94,6 +97,7 @@
 	// need these two below?
 	SSmachines.setup_template_powernets(cables)
 	SSair.setup_template_machinery(atmos_machines)
+	SSshuttle.setup_shuttles(ports)
 
 	//calculate all turfs inside the border
 	var/list/template_and_bordering_turfs = block(