Replaced all 'file.extension' references with 'relativepath/file.extension' using a script by thvortex of ss13-daedalus.

All credits to the author for this handy little script.
I Committed the modified python script to tool directory. Although it needs to be in the root folder of your repo to work.

To notice the improved compile times, in dreammaker go to Build > Preferences > and untick "automatically set file_dir for subfolders"

If this commit inteferes with any large projects just revert it, do your thing, then rerun the script. Easy-peasy.

git-svn-id: http://tgstation13.googlecode.com/svn/trunk@4488 316c924e-a436-60f5-8080-3fe189b3f50e

code/WorkInProgress/virus2/analyser.dm

@@ -1,6 +1,6 @@
 /obj/machinery/disease2/diseaseanalyser
 	name = "Disease Analyser"
-	icon = 'virology.dmi'
+	icon = 'icons/obj/virology.dmi'
 	icon_state = "analyser"
 	anchored = 1
 	density = 1

code/WorkInProgress/virus2/biohazard destroyer.dm

@@ -1,6 +1,6 @@
 /obj/machinery/disease2/biodestroyer
 	name = "Biohazard destroyer"
-	icon = 'disposal.dmi'
+	icon = 'icons/obj/pipes/disposal.dmi'
 	icon_state = "disposalbio"
 	var/list/accepts = list(/obj/item/clothing,/obj/item/weapon/virusdish/,/obj/item/weapon/cureimplanter,/obj/item/weapon/diseasedisk,/obj/item/weapon/reagent_containers)
 	density = 1
@@ -11,7 +11,7 @@
 		if(I.type in typesof(path))
 			user.drop_item()
 			del(I)
-			overlays += image('disposal.dmi', "dispover-handle")
+			overlays += image('icons/obj/pipes/disposal.dmi', "dispover-handle")
 			return
 	user.drop_item()
 	I.loc = src.loc

code/WorkInProgress/virus2/cureimplanter.dm

@@ -1,6 +1,6 @@
 /obj/item/weapon/cureimplanter
 	name = "Hypospray injector"
-	icon = 'items.dmi'
+	icon = 'icons/obj/items.dmi'
 	icon_state = "implanter1"
 	var/datum/disease2/resistance/resistance = null
 	var/works = 0

code/WorkInProgress/virus2/curer.dm

@@ -1,6 +1,6 @@
 /obj/machinery/computer/curer
 	name = "Cure Research Machine"
-	icon = 'computer.dmi'
+	icon = 'icons/obj/computer.dmi'
 	icon_state = "dna"
 	var/curing
 	var/virusing
@@ -9,7 +9,7 @@
 
 /obj/machinery/computer/curer/attackby(var/obj/I as obj, var/mob/user as mob)
 	if(istype(I, /obj/item/weapon/screwdriver))
-		playsound(src.loc, 'Screwdriver.ogg', 50, 1)
+		playsound(src.loc, 'sound/items/Screwdriver.ogg', 50, 1)
 		if(do_after(user, 20))
 			if (src.stat & BROKEN)
 				user << "\blue The broken glass falls out."

code/WorkInProgress/virus2/diseasesplicer.dm

@@ -1,6 +1,6 @@
 /obj/machinery/computer/diseasesplicer
 	name = "Disease Splicer"
-	icon = 'computer.dmi'
+	icon = 'icons/obj/computer.dmi'
 	icon_state = "crew"
 
 	var/datum/disease2/effectholder/memorybank = null
@@ -13,7 +13,7 @@
 
 /obj/machinery/computer/diseasesplicer/attackby(var/obj/I as obj, var/mob/user as mob)
 	if(istype(I, /obj/item/weapon/screwdriver))
-		playsound(src.loc, 'Screwdriver.ogg', 50, 1)
+		playsound(src.loc, 'sound/items/Screwdriver.ogg', 50, 1)
 		if(do_after(user, 20))
 			if (src.stat & BROKEN)
 				user << "\blue The broken glass falls out."
@@ -173,7 +173,7 @@
 
 /obj/item/weapon/diseasedisk
 	name = "Blank GNA disk"
-	icon = 'items.dmi'
+	icon = 'icons/obj/items.dmi'
 	icon_state = "datadisk0"
 	var/datum/disease2/effectholder/effect = null
 	var/stage = 1

code/WorkInProgress/virus2/dishincubator.dm

@@ -2,7 +2,7 @@
 	name = "Pathogenic incubator"
 	density = 1
 	anchored = 1
-	icon = 'virology.dmi'
+	icon = 'icons/obj/virology.dmi'
 	icon_state = "incubator"
 	var/obj/item/weapon/virusdish/dish
 	var/obj/item/weapon/reagent_containers/glass/beaker = null

code/WorkInProgress/virus2/isolator.dm

@@ -2,7 +2,7 @@
 	name = "Pathogenic Isolator"
 	density = 1
 	anchored = 1
-	icon = 'virology.dmi'
+	icon = 'icons/obj/virology.dmi'
 	icon_state = "isolator"
 	var/datum/disease2/disease/virus2 = null
 	var/isolating = 0
@@ -115,7 +115,7 @@
 
 /obj/item/weapon/virusdish
 	name = "Virus containment/growth dish"
-	icon = 'items.dmi'
+	icon = 'icons/obj/items.dmi'
 	icon_state = "implantcase-b"
 	var/datum/disease2/disease/virus2 = null
 	var/growth = 0

code/WorkInProgress/virus2/monkeydispensor.dm

@@ -1,6 +1,6 @@
 /obj/machinery/disease2/monkeycloner
 	name = "Monkey dispensor"
-	icon = 'cloning.dmi'
+	icon = 'icons/obj/cloning.dmi'
 	icon_state = "pod_0"
 	density = 1
 	anchored = 1