Pipe fixes

code/ATMOSPHERICS/atmospherics.dm

@@ -41,11 +41,14 @@ Pipelines + Other Objects -> Pipe network
 	if(!pipe_color_check(pipe_color))
 		pipe_color = null
 
+	..()
+	
+/obj/machinery/atmospherics/initialize()
+	..()
+
 	if(can_unwrench)
 		stored = new(src, make_from = src)
 
-	..()
-
 /obj/machinery/atmospherics/Destroy()
 	for(var/mob/living/M in src) //ventcrawling is serious business
 		M.remove_ventcrawl()
@@ -210,7 +213,7 @@ Pipelines + Other Objects -> Pipe network
 	dir = D
 	initialize_directions = P
 	var/turf/T = loc
-	level = T.intact ? 2 : 1
+	level = T.intact ? 2 : 1	
 	initialize()
 	var/list/nodes = pipeline_expansion()
 	for(var/obj/machinery/atmospherics/A in nodes)

code/ATMOSPHERICS/components/binary_devices/binary_atmos_base.dm

@@ -42,6 +42,7 @@
 	return ..()
 
 /obj/machinery/atmospherics/binary/initialize()
+	..()
 	var/node2_connect = dir
 	var/node1_connect = turn(dir, 180)
 

code/ATMOSPHERICS/components/omni_devices/omni_base.dm

@@ -57,6 +57,7 @@
 	return ..()
 
 /obj/machinery/atmospherics/omni/initialize()
+	..()
 	for(var/datum/omni_port/P in ports)
 		if(P.node || P.mode == 0)
 			continue

code/ATMOSPHERICS/components/trinary_devices/trinary_base.dm

@@ -67,7 +67,7 @@
 	return ..()
 	
 /obj/machinery/atmospherics/trinary/initialize()
-
+	..()
 	//Mixer:
 	//1 and 2 is input
 	//Node 3 is output
@@ -78,10 +78,6 @@
 	//Node 2 is filtered output
 	//Node 3 is rest output
 	//If we flip the filter, 1 and 3 shall exchange positions
-	
-	if(can_unwrench) // Overridden here to avoid having to snowflake the flipped/icon_state on the construction
-		qdel(stored)
-		stored = new(src, make_from = src) 
 
 	var/node1_connect = turn(dir, -180)
 	var/node2_connect = turn(dir, -90)

code/ATMOSPHERICS/components/unary_devices/unary_base.dm

@@ -23,6 +23,7 @@
 	return ..()
 
 /obj/machinery/atmospherics/unary/initialize()
+	..()
 	for(var/obj/machinery/atmospherics/target in get_step(src, dir))
 		if(target.initialize_directions & get_dir(target,src))
 			var/c = check_connect_types(target,src)

code/ATMOSPHERICS/pipes/cap.dm

@@ -62,6 +62,7 @@
 	overlays += icon_manager.get_atmos_icon("pipe", , pipe_color, "cap" + icon_connect_type)
 
 /obj/machinery/atmospherics/pipe/cap/initialize()
+	..()
 	for(var/obj/machinery/atmospherics/target in get_step(src, dir))
 		if(target.initialize_directions & get_dir(target,src))
 			var/c = check_connect_types(target,src)

code/ATMOSPHERICS/pipes/manifold.dm

@@ -33,6 +33,7 @@
 	icon = null
 	
 /obj/machinery/atmospherics/pipe/manifold/initialize()
+	..()
 	for(var/D in cardinal)
 		if(D == dir)
 			continue

code/ATMOSPHERICS/pipes/manifold4w.dm

@@ -152,6 +152,7 @@
 	update_icon()
 
 /obj/machinery/atmospherics/pipe/manifold4w/initialize()
+	..()
 	for(var/D in cardinal)
 		for(var/obj/machinery/atmospherics/target in get_step(src, D))
 			if(target.initialize_directions & get_dir(target,src))

code/ATMOSPHERICS/pipes/simple/pipe_simple.dm

@@ -44,6 +44,7 @@
 			initialize_directions = SOUTH|WEST
 		
 /obj/machinery/atmospherics/pipe/simple/initialize()
+	..()
 	normalize_dir()
 	var/N = 2
 	for(var/D in cardinal)