[READY] A few additions, tweaks, and fixes for integrated circuits (#36270)

* A few additions, tweaks, and fixes for integrated circuits, and some very minor tweaks to hydroponics and carbon/silicon examine() to support those changes.

🆑 SailorDave
rscadd: A new manipulation circuit, the Seed Extractor. Extracts seeds from produce, and outputs a list of the extracted seeds.
rscadd: A new list circuit, the List Filter. Searches through a list for anything matching the desired element and outputs two lists: one containing just the matches, and the other with matches filtered out.
rscadd: A new list circuit, the Set circuit. Removes duplicate entries from a list.
tweak: The Plant Manipulation circuit can now plant seeds, and outputs a list of harvested plants.
tweak: Reagent circuits can now irrigate connected hydroponic trays and inject blood samples into Replica pods.
tweak: The Examiner circuit outputs worn items and other examined details of carbon and silicon mobs into the description pin.
tweak: List Advanced Locator circuit now accepts refs as well as strings.
bugfix: Fixed the Power Transmitter circuit not properly displaying a message when activated.
bugfix: Medical Analyzer circuit can now properly scan non-human mobs.
/🆑

Additional details:
- Plant Manipulation: obj/item/seeds harvest() proc and obj/machinery/hydroponics attack_hand() procs were adjusted slightly to allow this, returning a list when harvested.

- Seed Extractor Module: obj/machinery/seed_extractor /proc/seedify() was adjusted to return a list of seeds.

- Hydroponics replica pod was adjusted to be injectable|drawable, and use reagents and on_reagent_change() rather than a hardcoded attackby(), so other injection methods can use it to allow blood sampling/future reagent reactions regardless of type.

- IC Examiner Module returns a list of examine() messages from mob/living/carbon, mob/living/carbon/human, mob/living/carbon/silicon, and mob/living/carbon/silicon/ai in the description data pin, rather than outputting null since they had an empty desc var. The relevant examine procs were adjusted to return their messages.

 - IC get_data() and set_pin_data() adjusted to return text/num properly and to WEAKREF/un-WEAKREF the contents of passed lists.

* fixes errors from screwy merge conflicts and replaces illegal proc name

* re-added a traits tag that accidentally got removed

* review changes

* plant analyzer outputs irrigation status and connected trays, search circuit uses 2 Cx down from 6

* examiner outputs the occupied turf of the examined object and can also scan turfs

* string inputs on circuit pins now use multiline input; fixed edit/remove not working on list pins; fixed large screens not outputting visible messages when held

* locomotion now has a cooldown of 0.1sec and their complexity + pathfinder complexity reduced

* assemblies can open doors they have access to from a card reader through collision

* Merge master branch; fixes pathfinder AStar runtime; fixes tile pointer; fixes material manager self-ref; various grammar touchups

* review changes

* fixes improper weakref type checking

* fixes seed extractor merge confict, removes unnecessary weakref change

* dang ol merge undoing my changes HECK

* updated to robbym's tile pointer PR with clearer var names

* added missing "not scanned" results to tile analyzer, removes duplicate circuit entries(???? how)

code/modules/integrated_electronics/core/assemblies.dm

@@ -23,6 +23,7 @@
 	var/use_cyborg_cell = TRUE
 	var/ext_next_use = 0
 	var/atom/collw
+	var/obj/item/card/id/access_card
 	var/allowed_circuit_action_flags = IC_ACTION_COMBAT | IC_ACTION_LONG_RANGE //which circuit flags are allowed
 	var/combat_circuits = 0 //number of combat cicuits in the assembly, used for diagnostic hud
 	var/long_range_circuits = 0 //number of long range cicuits in the assembly, used for diagnostic hud
@@ -66,6 +67,10 @@
 /obj/item/device/electronic_assembly/Collide(atom/AM)
 	collw = AM
 	.=..()
+	if((istype(collw, /obj/machinery/door/airlock) ||  istype(collw, /obj/machinery/door/window)) && (!isnull(access_card)))
+		var/obj/machinery/door/D = collw
+		if(D.check_access(access_card))
+			D.open()
 
 /obj/item/device/electronic_assembly/Initialize()
 	.=..()
@@ -81,10 +86,13 @@
 	diag_hud_set_circuitstat()
 	diag_hud_set_circuittracking()
 
+	access_card = new /obj/item/card/id(src)
+
 /obj/item/device/electronic_assembly/Destroy()
 	STOP_PROCESSING(SScircuit, src)
 	for(var/datum/atom_hud/data/diagnostic/diag_hud in GLOB.huds)
 		diag_hud.remove_from_hud(src)
+	QDEL_NULL(access_card)
 	return ..()
 
 /obj/item/device/electronic_assembly/process()

code/modules/integrated_electronics/core/helpers.dm

@@ -21,6 +21,10 @@
 
 
 /obj/item/integrated_circuit/proc/set_pin_data(pin_type, pin_number, datum/new_data)
+	if(islist(new_data))
+		for(var/i in 1 to length(new_data))
+			if (istype(new_data) && !isweakref(new_data))
+				new_data[i] = WEAKREF(new_data[i])
 	if (istype(new_data) && !isweakref(new_data))
 		new_data = WEAKREF(new_data)
 	var/datum/integrated_io/pin = get_pin_ref(pin_type, pin_number)
@@ -55,6 +59,10 @@
 	return
 
 /datum/integrated_io/proc/get_data()
+	if(islist(data))
+		for(var/i in 1 to length(data))
+			if(isweakref(data[i]))
+				data[i] = data[i].resolve()
 	if(isweakref(data))
 		return data.resolve()
 	return data

code/modules/integrated_electronics/core/pins.dm

@@ -185,7 +185,7 @@ D [1]/  ||
 	var/new_data = null
 	switch(type_to_use)
 		if("string")
-			new_data = stripped_input(user, "Now type in a string.","[src] string writing", istext(default) ? default : null, no_trim = TRUE)
+			new_data = stripped_multiline_input(user, "Now type in a string.","[src] string writing", istext(default) ? default : null, no_trim = TRUE)
 			if(istext(new_data) && holder.check_interactivity(user) )
 				to_chat(user, "<span class='notice'>You input "+new_data+" into the pin.</span>")
 				return new_data

code/modules/integrated_electronics/core/special_pins/list_pin.dm

@@ -13,6 +13,8 @@
 	t += "List length: [my_list.len]<br>"
 	t += "<a href='?src=[REF(src)]'>\[Refresh\]</a>  |  "
 	t += "<a href='?src=[REF(src)];add=1'>\[Add\]</a>  |  "
+	t += "<a href='?src=[REF(src)];remove=1'>\[Remove\]</a>  |  "
+	t += "<a href='?src=[REF(src)];edit=1'>\[Edit\]</a>  |  "
 	t += "<a href='?src=[REF(src)];swap=1'>\[Swap\]</a>  |  "
 	t += "<a href='?src=[REF(src)];clear=1'>\[Clear\]</a><br>"
 	t += "<hr>"
@@ -43,7 +45,7 @@
 		return
 	if(!position)
 		return
-	var/target_entry = my_list.Find(position)
+	var/target_entry = my_list[position]
 	if(target_entry)
 		my_list.Remove(target_entry)
 
@@ -67,7 +69,7 @@
 	if(holder.check_interactivity(user) && target_entry)
 		var/edited_entry = ask_for_data_type(user, target_entry)
 		if(edited_entry)
-			target_entry = edited_entry
+			my_list[my_list.Find(target_entry)] = edited_entry
 
 /datum/integrated_io/lists/proc/edit_in_list_by_position(mob/user, var/position)
 	var/list/my_list = data
@@ -76,11 +78,11 @@
 		return
 	if(!position)
 		return
-	var/target_entry = my_list.Find(position)
+	var/target_entry = my_list[position]
 	if(target_entry)
 		var/edited_entry = ask_for_data_type(user, target_entry)
 		if(edited_entry)
-			target_entry = edited_entry
+			my_list[position] = edited_entry
 
 /datum/integrated_io/lists/proc/swap_inside_list(mob/user, var/first_target, var/second_target)
 	var/list/my_list = data

code/modules/integrated_electronics/core/special_pins/string_pin.dm

@@ -3,7 +3,7 @@
 	name = "string pin"
 
 /datum/integrated_io/string/ask_for_pin_data(mob/user)
-	var/new_data = stripped_input(user, "Please type in a string.","[src] string writing", no_trim = TRUE)
+	var/new_data = stripped_multiline_input(user, "Please type in a string.","[src] string writing", no_trim = TRUE)
 	if(holder.check_interactivity(user) )
 		to_chat(user, "<span class='notice'>You input [new_data ? "[new_data]" : "NULL"] into the pin.</span>")
 		write_data_to_pin(new_data)