ok this is going to be a pain in the ass ain't it (#2458)

lets hope nothing blows up this time (Flags PR but it works!)

code/controllers/subsystem/atoms.dm

@@ -6,7 +6,7 @@
 SUBSYSTEM_DEF(atoms)
 	name = "Atoms"
 	init_order = INIT_ORDER_ATOMS
-	flags = SS_NO_FIRE
+	flags_1 = SS_NO_FIRE
 
 	var/initialized = INITIALIZATION_INSSATOMS
 	var/old_initialized
@@ -30,7 +30,7 @@ SUBSYSTEM_DEF(atoms)
 	initialized = INITIALIZATION_INNEW_MAPLOAD
 
 	LAZYINITLIST(late_loaders)
-	
+
 	var/count
 	var/list/mapload_arg = list(TRUE)
 	if(atoms)
@@ -60,10 +60,10 @@ SUBSYSTEM_DEF(atoms)
 			A.LateInitialize()
 		testing("Late initialized [late_loaders.len] atoms")
 		late_loaders.Cut()
-	
+
 	if(atoms)
 		. = created_atoms + atoms
-		created_atoms = null 
+		created_atoms = null
 
 /datum/controller/subsystem/atoms/proc/InitAtom(atom/A, list/arguments)
 	var/the_type = A.type
@@ -77,7 +77,7 @@ SUBSYSTEM_DEF(atoms)
 
 	if(start_tick != world.time)
 		BadInitializeCalls[the_type] |= BAD_INIT_SLEPT
-	
+
 	var/qdeleted = FALSE
 
 	if(result != INITIALIZE_HINT_NORMAL)
@@ -92,12 +92,12 @@ SUBSYSTEM_DEF(atoms)
 				qdeleted = TRUE
 			else
 				BadInitializeCalls[the_type] |= BAD_INIT_NO_HINT
-				
+
 	if(!A)	//possible harddel
 		qdeleted = TRUE
 	else if(!A.initialized)
 		BadInitializeCalls[the_type] |= BAD_INIT_DIDNT_INIT
-	
+
 	return qdeleted || QDELING(A)
 
 /datum/controller/subsystem/atoms/proc/map_loader_begin()