[READY] A few additions, tweaks, and fixes for integrated circuits (#36270)

* A few additions, tweaks, and fixes for integrated circuits, and some very minor tweaks to hydroponics and carbon/silicon examine() to support those changes.

🆑 SailorDave
rscadd: A new manipulation circuit, the Seed Extractor. Extracts seeds from produce, and outputs a list of the extracted seeds.
rscadd: A new list circuit, the List Filter. Searches through a list for anything matching the desired element and outputs two lists: one containing just the matches, and the other with matches filtered out.
rscadd: A new list circuit, the Set circuit. Removes duplicate entries from a list.
tweak: The Plant Manipulation circuit can now plant seeds, and outputs a list of harvested plants.
tweak: Reagent circuits can now irrigate connected hydroponic trays and inject blood samples into Replica pods.
tweak: The Examiner circuit outputs worn items and other examined details of carbon and silicon mobs into the description pin.
tweak: List Advanced Locator circuit now accepts refs as well as strings.
bugfix: Fixed the Power Transmitter circuit not properly displaying a message when activated.
bugfix: Medical Analyzer circuit can now properly scan non-human mobs.
/🆑

Additional details:
- Plant Manipulation: obj/item/seeds harvest() proc and obj/machinery/hydroponics attack_hand() procs were adjusted slightly to allow this, returning a list when harvested.

- Seed Extractor Module: obj/machinery/seed_extractor /proc/seedify() was adjusted to return a list of seeds.

- Hydroponics replica pod was adjusted to be injectable|drawable, and use reagents and on_reagent_change() rather than a hardcoded attackby(), so other injection methods can use it to allow blood sampling/future reagent reactions regardless of type.

- IC Examiner Module returns a list of examine() messages from mob/living/carbon, mob/living/carbon/human, mob/living/carbon/silicon, and mob/living/carbon/silicon/ai in the description data pin, rather than outputting null since they had an empty desc var. The relevant examine procs were adjusted to return their messages.

 - IC get_data() and set_pin_data() adjusted to return text/num properly and to WEAKREF/un-WEAKREF the contents of passed lists.

* fixes errors from screwy merge conflicts and replaces illegal proc name

* re-added a traits tag that accidentally got removed

* review changes

* plant analyzer outputs irrigation status and connected trays, search circuit uses 2 Cx down from 6

* examiner outputs the occupied turf of the examined object and can also scan turfs

* string inputs on circuit pins now use multiline input; fixed edit/remove not working on list pins; fixed large screens not outputting visible messages when held

* locomotion now has a cooldown of 0.1sec and their complexity + pathfinder complexity reduced

* assemblies can open doors they have access to from a card reader through collision

* Merge master branch; fixes pathfinder AStar runtime; fixes tile pointer; fixes material manager self-ref; various grammar touchups

* review changes

* fixes improper weakref type checking

* fixes seed extractor merge confict, removes unnecessary weakref change

* dang ol merge undoing my changes HECK

* updated to robbym's tile pointer PR with clearer var names

* added missing "not scanned" results to tile analyzer, removes duplicate circuit entries(???? how)

code/datums/weakrefs.dm

@@ -2,6 +2,7 @@
 	if(istype(input) && !QDELETED(input))
 		if(istype(input, /datum/weakref))
 			return input
+
 		if(!input.weak_reference)
 			input.weak_reference = new /datum/weakref(input)
 		return input.weak_reference

code/modules/hydroponics/grown/replicapod.dm

@@ -7,12 +7,14 @@
 	species = "replicapod"
 	plantname = "Replica Pod"
 	product = /mob/living/carbon/human //verrry special -- Urist
+	container_type = INJECTABLE|DRAWABLE
 	lifespan = 50
 	endurance = 8
 	maturation = 10
 	production = 1
 	yield = 1 //seeds if there isn't a dna inside
 	potency = 30
+	var/volume = 5
 	var/ckey = null
 	var/realName = null
 	var/datum/mind/mind = null
@@ -23,28 +25,38 @@
 	var/list/traits = null
 	var/contains_sample = 0
 
-/obj/item/seeds/replicapod/attackby(obj/item/W, mob/user, params)
-	if(istype(W, /obj/item/reagent_containers/syringe))
-		if(!contains_sample)
-			for(var/datum/reagent/blood/bloodSample in W.reagents.reagent_list)
-				if(bloodSample.data["mind"] && bloodSample.data["cloneable"] == 1)
-					mind = bloodSample.data["mind"]
-					ckey = bloodSample.data["ckey"]
-					realName = bloodSample.data["real_name"]
-					blood_gender = bloodSample.data["gender"]
-					blood_type = bloodSample.data["blood_type"]
-					features = bloodSample.data["features"]
-					factions = bloodSample.data["factions"]
-					traits = bloodSample.data["traits"]
-					W.reagents.clear_reagents()
-					to_chat(user, "<span class='notice'>You inject the contents of the syringe into the seeds.</span>")
-					contains_sample = 1
-				else
-					to_chat(user, "<span class='warning'>The seeds reject the sample!</span>")
-		else
-			to_chat(user, "<span class='warning'>The seeds already contain a genetic sample!</span>")
-	else
-		return ..()
+/obj/item/seeds/replicapod/Initialize()
+	. = ..()
+
+	create_reagents(volume)
+
+/obj/item/seeds/replicapod/on_reagent_change(changetype)
+	if(changetype == ADD_REAGENT)
+		var/datum/reagent/blood/B = reagents.has_reagent("blood")
+		if(B)
+			if(B.data["mind"] && B.data["cloneable"])
+				mind = B.data["mind"]
+				ckey = B.data["ckey"]
+				realName = B.data["real_name"]
+				blood_gender = B.data["gender"]
+				blood_type = B.data["blood_type"]
+				features = B.data["features"]
+				factions = B.data["factions"]
+				factions = B.data["traits"]
+				contains_sample = TRUE
+				visible_message("<span class='notice'>The [src] is injected with a fresh blood sample.</span>")
+			else
+				visible_message("<span class='warning'>The [src] rejects the sample!</span>")
+
+	if(!reagents.has_reagent("blood"))
+		mind = null
+		ckey = null
+		realName = null
+		blood_gender = null
+		blood_type = null
+		features = null
+		factions = null
+		contains_sample = FALSE
 
 /obj/item/seeds/replicapod/get_analyzer_text()
 	var/text = ..()
@@ -53,10 +65,11 @@
 	return text
 
 
-/obj/item/seeds/replicapod/harvest(mob/user = usr) //now that one is fun -- Urist
+/obj/item/seeds/replicapod/harvest(mob/user) //now that one is fun -- Urist
 	var/obj/machinery/hydroponics/parent = loc
 	var/make_podman = 0
 	var/ckey_holder = null
+	var/list/result = list()
 	if(CONFIG_GET(flag/revival_pod_plants))
 		if(ckey)
 			for(var/mob/M in GLOB.player_list)
@@ -113,6 +126,8 @@
 		var/output_loc = parent.Adjacent(user) ? user.loc : parent.loc //needed for TK
 		for(var/i=0,i<seed_count,i++)
 			var/obj/item/seeds/replicapod/harvestseeds = src.Copy()
+			result.Add(harvestseeds)
 			harvestseeds.forceMove(output_loc)
 
 	parent.update_tray()
+	return result

code/modules/hydroponics/hydroponics.dm

@@ -850,7 +850,8 @@
 	if(issilicon(user)) //How does AI know what plant is?
 		return
 	if(harvest)
-		myseed.harvest(user)
+		return myseed.harvest(user)
+
 	else if(dead)
 		dead = 0
 		to_chat(user, "<span class='notice'>You remove the dead plant from [src].</span>")
@@ -858,9 +859,10 @@
 		myseed = null
 		update_icon()
 	else
-		examine(user)
+		if(user)
+			examine(user)
 
-/obj/machinery/hydroponics/proc/update_tray(mob/user = usr)
+/obj/machinery/hydroponics/proc/update_tray(mob/user)
 	harvest = 0
 	lastproduce = age
 	if(istype(myseed, /obj/item/seeds/replicapod))

code/modules/hydroponics/seed_extractor.dm

@@ -1,5 +1,6 @@
 /proc/seedify(obj/item/O, t_max, obj/machinery/seed_extractor/extractor, mob/living/user)
 	var/t_amount = 0
+	var/list/seeds = list()
 	if(t_max == -1)
 		if(extractor)
 			t_max = rand(1,4) * extractor.seed_multiplier
@@ -17,10 +18,11 @@
 				return
 			while(t_amount < t_max)
 				var/obj/item/seeds/t_prod = F.seed.Copy()
+				seeds.Add(t_prod)
 				t_prod.forceMove(seedloc)
 				t_amount++
 			qdel(O)
-			return 1
+			return seeds
 
 	else if(istype(O, /obj/item/grown))
 		var/obj/item/grown/F = O

code/modules/hydroponics/seeds.dm

@@ -136,7 +136,7 @@
 	return return_yield
 
 
-/obj/item/seeds/proc/harvest(mob/user = usr)
+/obj/item/seeds/proc/harvest(mob/user)
 	var/obj/machinery/hydroponics/parent = loc //for ease of access
 	var/t_amount = 0
 	var/list/result = list()
@@ -151,7 +151,7 @@
 		product_name = t_prod.name
 	if(getYield() >= 1)
 		SSblackbox.record_feedback("tally", "food_harvested", getYield(), product_name)
-	parent.update_tray()
+	parent.update_tray(user)
 
 	return result
 

code/modules/integrated_electronics/core/assemblies.dm

@@ -23,6 +23,7 @@
 	var/use_cyborg_cell = TRUE
 	var/ext_next_use = 0
 	var/atom/collw
+	var/obj/item/card/id/access_card
 	var/allowed_circuit_action_flags = IC_ACTION_COMBAT | IC_ACTION_LONG_RANGE //which circuit flags are allowed
 	var/combat_circuits = 0 //number of combat cicuits in the assembly, used for diagnostic hud
 	var/long_range_circuits = 0 //number of long range cicuits in the assembly, used for diagnostic hud
@@ -66,6 +67,10 @@
 /obj/item/device/electronic_assembly/Collide(atom/AM)
 	collw = AM
 	.=..()
+	if((istype(collw, /obj/machinery/door/airlock) ||  istype(collw, /obj/machinery/door/window)) && (!isnull(access_card)))
+		var/obj/machinery/door/D = collw
+		if(D.check_access(access_card))
+			D.open()
 
 /obj/item/device/electronic_assembly/Initialize()
 	.=..()
@@ -81,10 +86,13 @@
 	diag_hud_set_circuitstat()
 	diag_hud_set_circuittracking()
 
+	access_card = new /obj/item/card/id(src)
+
 /obj/item/device/electronic_assembly/Destroy()
 	STOP_PROCESSING(SScircuit, src)
 	for(var/datum/atom_hud/data/diagnostic/diag_hud in GLOB.huds)
 		diag_hud.remove_from_hud(src)
+	QDEL_NULL(access_card)
 	return ..()
 
 /obj/item/device/electronic_assembly/process()

code/modules/integrated_electronics/core/helpers.dm

@@ -21,6 +21,10 @@
 
 
 /obj/item/integrated_circuit/proc/set_pin_data(pin_type, pin_number, datum/new_data)
+	if(islist(new_data))
+		for(var/i in 1 to length(new_data))
+			if (istype(new_data) && !isweakref(new_data))
+				new_data[i] = WEAKREF(new_data[i])
 	if (istype(new_data) && !isweakref(new_data))
 		new_data = WEAKREF(new_data)
 	var/datum/integrated_io/pin = get_pin_ref(pin_type, pin_number)
@@ -55,6 +59,10 @@
 	return
 
 /datum/integrated_io/proc/get_data()
+	if(islist(data))
+		for(var/i in 1 to length(data))
+			if(isweakref(data[i]))
+				data[i] = data[i].resolve()
 	if(isweakref(data))
 		return data.resolve()
 	return data

code/modules/integrated_electronics/core/pins.dm

@@ -185,7 +185,7 @@ D [1]/  ||
 	var/new_data = null
 	switch(type_to_use)
 		if("string")
-			new_data = stripped_input(user, "Now type in a string.","[src] string writing", istext(default) ? default : null, no_trim = TRUE)
+			new_data = stripped_multiline_input(user, "Now type in a string.","[src] string writing", istext(default) ? default : null, no_trim = TRUE)
 			if(istext(new_data) && holder.check_interactivity(user) )
 				to_chat(user, "<span class='notice'>You input "+new_data+" into the pin.</span>")
 				return new_data

code/modules/integrated_electronics/core/special_pins/list_pin.dm

@@ -13,6 +13,8 @@
 	t += "List length: [my_list.len]<br>"
 	t += "<a href='?src=[REF(src)]'>\[Refresh\]</a>  |  "
 	t += "<a href='?src=[REF(src)];add=1'>\[Add\]</a>  |  "
+	t += "<a href='?src=[REF(src)];remove=1'>\[Remove\]</a>  |  "
+	t += "<a href='?src=[REF(src)];edit=1'>\[Edit\]</a>  |  "
 	t += "<a href='?src=[REF(src)];swap=1'>\[Swap\]</a>  |  "
 	t += "<a href='?src=[REF(src)];clear=1'>\[Clear\]</a><br>"
 	t += "<hr>"
@@ -43,7 +45,7 @@
 		return
 	if(!position)
 		return
-	var/target_entry = my_list.Find(position)
+	var/target_entry = my_list[position]
 	if(target_entry)
 		my_list.Remove(target_entry)
 
@@ -67,7 +69,7 @@
 	if(holder.check_interactivity(user) && target_entry)
 		var/edited_entry = ask_for_data_type(user, target_entry)
 		if(edited_entry)
-			target_entry = edited_entry
+			my_list[my_list.Find(target_entry)] = edited_entry
 
 /datum/integrated_io/lists/proc/edit_in_list_by_position(mob/user, var/position)
 	var/list/my_list = data
@@ -76,11 +78,11 @@
 		return
 	if(!position)
 		return
-	var/target_entry = my_list.Find(position)
+	var/target_entry = my_list[position]
 	if(target_entry)
 		var/edited_entry = ask_for_data_type(user, target_entry)
 		if(edited_entry)
-			target_entry = edited_entry
+			my_list[position] = edited_entry
 
 /datum/integrated_io/lists/proc/swap_inside_list(mob/user, var/first_target, var/second_target)
 	var/list/my_list = data

code/modules/integrated_electronics/core/special_pins/string_pin.dm

@@ -3,7 +3,7 @@
 	name = "string pin"
 
 /datum/integrated_io/string/ask_for_pin_data(mob/user)
-	var/new_data = stripped_input(user, "Please type in a string.","[src] string writing", no_trim = TRUE)
+	var/new_data = stripped_multiline_input(user, "Please type in a string.","[src] string writing", no_trim = TRUE)
 	if(holder.check_interactivity(user) )
 		to_chat(user, "<span class='notice'>You input [new_data ? "[new_data]" : "NULL"] into the pin.</span>")
 		write_data_to_pin(new_data)

code/modules/integrated_electronics/subtypes/access.dm

@@ -19,6 +19,9 @@
 	var/list/access = I.GetAccess()
 	var/passkey = strtohex(XorEncrypt(json_encode(access), SScircuit.cipherkey))
 
+	if(assembly)
+		assembly.access_card.access = access
+
 	if(card) // An ID card.
 		set_pin_data(IC_OUTPUT, 1, card.registered_name)
 		set_pin_data(IC_OUTPUT, 2, card.assignment)

code/modules/integrated_electronics/subtypes/input.dm

@@ -70,7 +70,7 @@
 	power_draw_per_use = 4
 
 /obj/item/integrated_circuit/input/textpad/ask_for_input(mob/user)
-	var/new_input = stripped_input(user, "Enter some words, please.",displayed_name)
+	var/new_input = stripped_multiline_input(user, "Enter some words, please.",displayed_name)
 	if(istext(new_input) && user.IsAdvancedToolUser())
 		set_pin_data(IC_OUTPUT, 1, new_input)
 		push_data()
@@ -91,7 +91,7 @@
 	power_draw_per_use = 40
 
 /obj/item/integrated_circuit/input/med_scanner/do_work()
-	var/mob/living/carbon/human/H = get_pin_data_as_type(IC_INPUT, 1, /mob/living/carbon/human)
+	var/mob/living/H = get_pin_data_as_type(IC_INPUT, 1, /mob/living)
 	if(!istype(H)) //Invalid input
 		return
 	if(H.Adjacent(get_turf(src))) // Like normal analysers, it can't be used at range.
@@ -125,7 +125,7 @@
 	power_draw_per_use = 80
 
 /obj/item/integrated_circuit/input/adv_med_scanner/do_work()
-	var/mob/living/carbon/human/H = get_pin_data_as_type(IC_INPUT, 1, /mob/living/carbon/human)
+	var/mob/living/H = get_pin_data_as_type(IC_INPUT, 1, /mob/living)
 	if(!istype(H)) //Invalid input
 		return
 	if(H in view(get_turf(src))) // Like medbot's analyzer it can be used in range..
@@ -216,7 +216,10 @@
 		"Nutrition level"			= IC_PINTYPE_NUMBER,
 		"harvest"			= IC_PINTYPE_NUMBER,
 		"dead"			= IC_PINTYPE_NUMBER,
-		"plant health"			= IC_PINTYPE_NUMBER
+		"plant health"			= IC_PINTYPE_NUMBER,
+		"self sustaining"		= IC_PINTYPE_NUMBER,
+		"using irrigation" 		= IC_PINTYPE_NUMBER,
+		"connected trays"		= IC_PINTYPE_LIST
 	)
 	activators = list("scan" = IC_PINTYPE_PULSE_IN, "on scanned" = IC_PINTYPE_PULSE_OUT)
 	spawn_flags = IC_SPAWN_RESEARCH
@@ -248,7 +251,9 @@
 		set_pin_data(IC_OUTPUT, 16, H.harvest)
 		set_pin_data(IC_OUTPUT, 17, H.dead)
 		set_pin_data(IC_OUTPUT, 18, H.plant_health)
-
+		set_pin_data(IC_OUTPUT, 19, H.self_sustaining)
+		set_pin_data(IC_OUTPUT, 20, H.using_irrigation)
+		set_pin_data(IC_OUTPUT, 21, H.FindConnected())
 	push_data()
 	activate_pin(2)
 
@@ -309,6 +314,7 @@
 		"amount of reagents"	= IC_PINTYPE_NUMBER,
 		"density"				= IC_PINTYPE_BOOLEAN,
 		"opacity"				= IC_PINTYPE_BOOLEAN,
+		"occupied turf"			= IC_PINTYPE_REF
 		)
 	activators = list(
 		"scan" = IC_PINTYPE_PULSE_IN,
@@ -319,7 +325,7 @@
 	power_draw_per_use = 80
 
 /obj/item/integrated_circuit/input/examiner/do_work()
-	var/atom/movable/H = get_pin_data_as_type(IC_INPUT, 1, /atom/movable)
+	var/atom/H = get_pin_data_as_type(IC_INPUT, 1, /atom)
 	var/turf/T = get_turf(src)
 
 	if(!istype(H) || !(H in view(T)))
@@ -327,6 +333,13 @@
 	else
 		set_pin_data(IC_OUTPUT, 1, H.name)
 		set_pin_data(IC_OUTPUT, 2, H.desc)
+
+		if(istype(H, /mob/living))
+			var/mob/living/M = H
+			var/msg = M.examine()
+			if(msg)
+				set_pin_data(IC_OUTPUT, 2, msg)
+
 		set_pin_data(IC_OUTPUT, 3, H.x-T.x)
 		set_pin_data(IC_OUTPUT, 4, H.y-T.y)
 		set_pin_data(IC_OUTPUT, 5, sqrt((H.x-T.x)*(H.x-T.x)+ (H.y-T.y)*(H.y-T.y)))
@@ -339,19 +352,20 @@
 		set_pin_data(IC_OUTPUT, 7, tr)
 		set_pin_data(IC_OUTPUT, 8, H.density)
 		set_pin_data(IC_OUTPUT, 9, H.opacity)
+		set_pin_data(IC_OUTPUT, 10, get_turf(H))
 		push_data()
 		activate_pin(2)
 
 /obj/item/integrated_circuit/input/turfpoint
-	name = "tile pointer"
-	desc = "This circuit will get tile ref with given absolute coorinates."
-	extended_desc = "If the machine	cannot see the target, it will not be able to scan it.\
-	This circuit will only work in an assembly."
+	name = "Tile pointer"
+	desc = "This circuit will get tile ref with given absolute coordinates."
+	extended_desc = "If the machine	cannot see the target, it will not be able to calculate the correct direction.\
+	This circuit works only inside an assembly."
 	icon_state = "numberpad"
 	complexity = 5
 	inputs = list("X" = IC_PINTYPE_NUMBER,"Y" = IC_PINTYPE_NUMBER)
 	outputs = list("tile" = IC_PINTYPE_REF)
-	activators = list("scan" = IC_PINTYPE_PULSE_IN, "on scanned" = IC_PINTYPE_PULSE_OUT,"not scanned" = IC_PINTYPE_PULSE_OUT)
+	activators = list("calculate dir" = IC_PINTYPE_PULSE_IN, "on calculated" = IC_PINTYPE_PULSE_OUT,"not calculated" = IC_PINTYPE_PULSE_OUT)
 	spawn_flags = IC_SPAWN_RESEARCH
 	power_draw_per_use = 40
 
@@ -374,7 +388,7 @@
 
 /obj/item/integrated_circuit/input/turfscan
 	name = "tile analyzer"
-	desc = "This machine vision system can analyze contents of desired tile.And can read letters on floor."
+	desc = "This circuit can analyze the contents of the scanned turf, and can read letters on the turf."
 	icon_state = "video_camera"
 	complexity = 5
 	inputs = list(
@@ -382,7 +396,8 @@
 		)
 	outputs = list(
 		"located ref" 		= IC_PINTYPE_LIST,
-		"Written letters" 	= IC_PINTYPE_STRING
+		"Written letters" 	= IC_PINTYPE_STRING,
+		"area"				= IC_PINTYPE_STRING
 		)
 	activators = list(
 		"scan" = IC_PINTYPE_PULSE_IN,
@@ -394,20 +409,23 @@
 	cooldown_per_use = 10
 
 /obj/item/integrated_circuit/input/turfscan/do_work()
-	var/turf/H = get_pin_data_as_type(IC_INPUT, 1, /turf)
-	var/turf/T = get_turf(src)
-	if(!istype(H)) //Invalid input
+	var/turf/scanned_turf = get_pin_data_as_type(IC_INPUT, 1, /turf)
+	var/turf/circuit_turf = get_turf(src)
+	var/area_name = get_area_name(scanned_turf)
+	if(!istype(scanned_turf)) //Invalid input
+		activate_pin(3)
 		return
 
-	if(H in view(T)) // This is a camera. It can't examine thngs,that it can't see.
-		var/list/cont = new()
-		for(var/obj/U in H)
-			cont += WEAKREF(U)
-		for(var/mob/U in H)
-			cont += WEAKREF(U)
-		set_pin_data(IC_OUTPUT, 1, cont)
+	if(scanned_turf in view(circuit_turf)) // This is a camera. It can't examine things that it can't see.
+		var/list/turf_contents = new()
+		for(var/obj/U in scanned_turf)
+			turf_contents += WEAKREF(U)
+		for(var/mob/U in scanned_turf)
+			turf_contents += WEAKREF(U)
+		set_pin_data(IC_OUTPUT, 1, turf_contents)
+		set_pin_data(IC_OUTPUT, 3, area_name)
 		var/list/St = new()
-		for(var/obj/effect/decal/cleanable/crayon/I in H)
+		for(var/obj/effect/decal/cleanable/crayon/I in scanned_turf)
 			St.Add(I.icon_state)
 		if(St.len)
 			set_pin_data(IC_OUTPUT, 2, jointext(St, ",", 1, 0))
@@ -509,21 +527,20 @@
 	var/turf/T = get_turf(src)
 	var/list/nearby_things = view(radius,T)
 	var/list/valid_things = list()
-	var/list/GI = list()
-	GI = I.data
-	for(var/G in GI)
-		if(isweakref(G))									//It should search by refs. But don't want.will fix it later.
-			var/datum/integrated_io/G1
-			G1.data = G
-			var/atom/A = G1.data.resolve()
-			var/desired_type = A.type
-			for(var/atom/thing in nearby_things)
-				if(thing.type != desired_type)
-					continue
-				valid_things.Add(WEAKREF(thing))
-		else if(istext(G))
-			for(var/atom/thing in nearby_things)
-				if(findtext(addtext(thing.name," ",thing.desc), G, 1, 0) )
+	var/list/input_list = list()
+	input_list = I.data
+	for(var/item in input_list)
+		if(!isnull(item) && !isnum(item))
+			if(istext(item))
+				for(var/atom/thing in nearby_things)
+					if(findtext(addtext(thing.name," ",thing.desc), item, 1, 0) )
+						valid_things.Add(WEAKREF(thing))
+			else
+				var/atom/A = item
+				var/desired_type = A.type
+				for(var/atom/thing in nearby_things)
+					if(thing.type != desired_type)
+						continue
 					valid_things.Add(WEAKREF(thing))
 	if(valid_things.len)
 		O.data = valid_things
@@ -974,9 +991,9 @@
 		activate_pin(3)
 
 /obj/item/integrated_circuit/input/matscan
-	name = "material scaner"
-	desc = "It's special module, designed to get information about material containers of different machinery.\
-			Like ORM, lathes, etc."
+	name = "material scanner"
+	desc = "This special module is designed to get information about material containers of different machinery, \
+			like ORM, lathes, etc."
 	icon_state = "video_camera"
 	complexity = 6
 	inputs = list(

code/modules/integrated_electronics/subtypes/lists.dm

@@ -84,6 +84,7 @@
 		"on failure" = IC_PINTYPE_PULSE_OUT,
 		)
 	icon_state = "addition"
+	complexity = 2
 	spawn_flags = IC_SPAWN_DEFAULT|IC_SPAWN_RESEARCH
 	cooldown_per_use = 1
 
@@ -100,6 +101,91 @@
 		activate_pin(3)
 
 
+/obj/item/integrated_circuit/lists/filter
+	name = "filter circuit"
+	desc = "This circuit will search through a list for anything matching the desired element(s) and outputs two lists: \
+	one containing just matching elements, and one with matching elements filtered out."
+	extended_desc = "Sample accepts lists. If no match is found, original list is sent to output 1."
+	inputs = list(
+		"input list" = IC_PINTYPE_LIST,
+		"sample" = IC_PINTYPE_ANY
+		)
+	outputs = list(
+		"list filtered" = IC_PINTYPE_LIST,
+		"list matched" = IC_PINTYPE_LIST
+		)
+	activators = list(
+		"compute" = IC_PINTYPE_PULSE_IN,
+		"on match" = IC_PINTYPE_PULSE_OUT,
+		"on no match" = IC_PINTYPE_PULSE_OUT
+		)
+	complexity = 6
+	icon_state = "addition"
+	spawn_flags = IC_SPAWN_DEFAULT|IC_SPAWN_RESEARCH
+
+/obj/item/integrated_circuit/lists/filter/do_work()
+	var/list/input_list = get_pin_data(IC_INPUT, 1)
+	var/sample = get_pin_data(IC_INPUT, 2)
+	var/list/sample_list = islist(sample) ? uniqueList(sample) : null
+	var/list/output_list1 = input_list.Copy()
+	var/list/output_list2 = list()
+	var/list/output = list()
+
+	for(var/input_item in input_list)
+		if(sample_list)
+			for(var/sample_item in sample_list)
+				if(!isnull(sample_item))
+					if(istext(input_item) && istext(sample_item) && findtext(input_item, sample_item))
+						output += input_item
+					if(istype(input_item, /atom) && istext(sample_item))
+						var/atom/input_item_atom = input_item
+						if(istext(sample_item) && findtext(input_item_atom.name, sample_item))
+							output += input_item
+				if(!istext(input_item))
+					if(input_item == sample_item)
+						output += input_item
+		else
+			if(!isnull(sample))
+				if(istext(input_item) && istext(sample) && findtext(input_item, sample))
+					output += input_item
+					continue
+				if(istype(input_item, /atom) && istext(sample))
+					var/atom/input_itema = input_item
+					if(findtext(input_itema.name, sample))
+						output += input_item
+			if(!istext(input_item))
+				if(input_item == sample)
+					output += input_item
+
+	output_list1.Remove(output)
+	output_list2.Add(output)
+	set_pin_data(IC_OUTPUT, 1, output_list1)
+	set_pin_data(IC_OUTPUT, 2, output_list2)
+	push_data()
+
+	output_list1 ~! input_list ? activate_pin(2) : activate_pin(3)
+
+/obj/item/integrated_circuit/lists/listset
+	name = "list set circuit"
+	desc = "This circuit will remove any duplicate entries from a list."
+	extended_desc = "If there are no duplicate entries, result list will be unchanged."
+	inputs = list(
+		"list" = IC_PINTYPE_LIST
+		)
+	outputs = list(
+		"list filtered" = IC_PINTYPE_LIST
+		)
+	icon_state = "addition"
+	spawn_flags = IC_SPAWN_DEFAULT|IC_SPAWN_RESEARCH
+
+/obj/item/integrated_circuit/lists/listset/do_work()
+	var/list/input_list = get_pin_data(IC_INPUT, 1)
+	input_list = uniqueList(input_list)
+
+	set_pin_data(IC_OUTPUT, 1, input_list)
+	push_data()
+	activate_pin(2)
+
 /obj/item/integrated_circuit/lists/at
 	name = "at circuit"
 	desc = "This circuit will pick an element from a list by the input index."
@@ -114,7 +200,7 @@
 	activators = list(
 		"compute" = IC_PINTYPE_PULSE_IN,
 		"on success" = IC_PINTYPE_PULSE_OUT,
-		"on failure" = IC_PINTYPE_PULSE_OUT,
+		"on failure" = IC_PINTYPE_PULSE_OUT
 		)
 	icon_state = "addition"
 	spawn_flags = IC_SPAWN_DEFAULT|IC_SPAWN_RESEARCH

code/modules/integrated_electronics/subtypes/manipulation.dm

@@ -137,7 +137,7 @@
 	being held, or anchored in some way. It should be noted that the ability to move is dependant on the type of assembly that this circuit inhabits."
 	w_class = WEIGHT_CLASS_SMALL
 	complexity = 10
-	cooldown_per_use = 8
+	cooldown_per_use = 1
 	ext_cooldown = 1
 	inputs = list("direction" = IC_PINTYPE_DIR)
 	outputs = list("obstacle" = IC_PINTYPE_REF)
@@ -240,61 +240,106 @@
 
 /obj/item/integrated_circuit/manipulation/plant_module
 	name = "plant manipulation module"
-	desc = "Used to uproot weeds or harvest plants in trays."
+	desc = "Used to uproot weeds and harvest/plant trays."
 	icon_state = "plant_m"
-	extended_desc = "The circuit accepts a reference to a hydroponic tray in an adjacent tile. \
-	Mode(0- harvest, 1-uproot weeds, 2-uproot plant) determinies action."
-	cooldown_per_use = 10
+	extended_desc = "The circuit accepts a reference to a hydroponic tray or an item in an adjacent tile. \
+	Mode input(0-harvest, 1-uproot weeds, 2-uproot plant, 3-plant seed) determines action. \
+	Harvesting returns a list of the harvested plants."
 	w_class = WEIGHT_CLASS_TINY
 	complexity = 10
-	inputs = list("target" = IC_PINTYPE_REF,"mode" = IC_PINTYPE_NUMBER)
-	outputs = list()
-	activators = list("pulse in" = IC_PINTYPE_PULSE_IN,"pulse out"=IC_PINTYPE_PULSE_OUT)
+	inputs = list("tray" = IC_PINTYPE_REF,"mode" = IC_PINTYPE_NUMBER,"item" = IC_PINTYPE_REF)
+	outputs = list("result" = IC_PINTYPE_LIST)
+	activators = list("pulse in" = IC_PINTYPE_PULSE_IN,"pulse out" = IC_PINTYPE_PULSE_OUT)
 	spawn_flags = IC_SPAWN_RESEARCH
 	power_draw_per_use = 50
 
 /obj/item/integrated_circuit/manipulation/plant_module/do_work()
 	..()
-	var/turf/T = get_turf(src)
+	var/obj/acting_object = get_object()
 	var/obj/OM = get_pin_data_as_type(IC_INPUT, 1, /obj)
-	if(istype(OM,/obj/structure/spacevine) && get_pin_data(IC_INPUT, 2) == 2)
-		qdel(OM)
+	var/obj/O = get_pin_data_as_type(IC_INPUT, 3, /obj/item)
+
+	if(!check_target(OM))
+		push_data()
 		activate_pin(2)
 		return
-	var/obj/machinery/hydroponics/AM = OM
-	if(!istype(AM)) //Invalid input
-		return FALSE
-	var/mob/living/M = get_turf(AM)
-	if(!M.Adjacent(T))
-		return //Can't reach
-	switch(get_pin_data(IC_INPUT, 2))
-		if(0)
-			if(AM.myseed)
-				if(AM.harvest)
-					AM.myseed.harvest()
-					AM.harvest = 0
-					AM.lastproduce = AM.age
-					if(!AM.myseed.get_gene(/datum/plant_gene/trait/repeated_harvest))
-						qdel(AM.myseed)
-						AM.myseed = null
-						AM.dead = 0
-					AM.update_icon()
-		if(1)
-			AM.weedlevel = 0
-		if(2)
-			if(AM.myseed) //Could be that they're just using it as a de-weeder
-				AM.age = 0
-				AM.plant_health = 0
-				if(AM.harvest)
-					AM.harvest = FALSE //To make sure they can't just put in another seed and insta-harvest it
-				qdel(AM.myseed)
-				AM.myseed = null
-			AM.weedlevel = 0 //Has a side effect of cleaning up those nasty weeds
-			AM.dead = 0
-			AM.update_icon()
-		else
-			activate_pin(2)
-			return FALSE
+
+	if(istype(OM,/obj/structure/spacevine) && check_target(OM) && get_pin_data(IC_INPUT, 2) == 2)
+		qdel(OM)
+		push_data()
+		activate_pin(2)
+		return
+
+	var/obj/machinery/hydroponics/TR = OM
+	if(istype(TR))
+		switch(get_pin_data(IC_INPUT, 2))
+			if(0)
+				var/list/harvest_output = TR.attack_hand()
+				for(var/i in 1 to length(harvest_output))
+					harvest_output[i] = WEAKREF(harvest_output[i])
+
+				if(harvest_output.len)
+					set_pin_data(IC_OUTPUT, 1, harvest_output)
+					push_data()
+			if(1)
+				TR.weedlevel = 0
+			if(2)
+				if(TR.myseed) //Could be that they're just using it as a de-weeder
+					TR.age = 0
+					TR.plant_health = 0
+					if(TR.harvest)
+						TR.harvest = FALSE //To make sure they can't just put in another seed and insta-harvest it
+					qdel(TR.myseed)
+					TR.myseed = null
+				TR.weedlevel = 0 //Has a side effect of cleaning up those nasty weeds
+				TR.dead = 0
+				TR.update_icon()
+			if(3)
+				if(!check_target(O))
+					activate_pin(2)
+					return FALSE
+
+				else if(istype(O, /obj/item/seeds) && !istype(O, /obj/item/seeds/sample))
+					if(!TR.myseed)
+						if(istype(O, /obj/item/seeds/kudzu))
+							investigate_log("had Kudzu planted in it by [acting_object] at ([x],[y],[z])","kudzu")
+						acting_object.visible_message("<span class='notice'>[acting_object] plants [O].</span>")
+						TR.dead = 0
+						TR.myseed = O
+						TR.age = 1
+						TR.plant_health = TR.myseed.endurance
+						TR.lastcycle = world.time
+						O.forceMove(TR)
+						TR.update_icon()
+	activate_pin(2)
+
+/obj/item/integrated_circuit/manipulation/seed_extractor
+	name = "seed extractor module"
+	desc = "Used to extract seeds from grown produce."
+	icon_state = "plant_m"
+	extended_desc = "The circuit accepts a reference to a plant item and extracts seeds from it, outputting the results to a list."
+	complexity = 8
+	inputs = list("target" = IC_PINTYPE_REF)
+	outputs = list("result" = IC_PINTYPE_LIST)
+	activators = list("pulse in" = IC_PINTYPE_PULSE_IN,"pulse out" = IC_PINTYPE_PULSE_OUT)
+	spawn_flags = IC_SPAWN_RESEARCH
+	power_draw_per_use = 50
+
+/obj/item/integrated_circuit/manipulation/seed_extractor/do_work()
+	..()
+	var/obj/O = get_pin_data_as_type(IC_INPUT, 1, /obj/item)
+	if(!check_target(O))
+		push_data()
+		activate_pin(2)
+		return
+
+	var/list/seed_output = seedify(O, -1)
+	for(var/i in 1 to length(seed_output))
+		seed_output[i] = WEAKREF(seed_output[i])
+
+	if(seed_output.len)
+		set_pin_data(IC_OUTPUT, 1, seed_output)
+		push_data()
 	activate_pin(2)
 
 /obj/item/integrated_circuit/manipulation/grabber
@@ -474,11 +519,12 @@
 
 /obj/item/integrated_circuit/manipulation/matman
 	name = "material manager"
-	desc = "It's module, designed to automatic storage and distribution of materials"
-	extended_desc = "The first input is ref to object of interaction.Second input used for interaction with stacks of materials.\
-					It accepts amount of sheets to insert.Inputs 3-13 used to direct mat transer between containers of machines.\
-					It accepts amount of material to transfer.Positive values means, that circuit will drain another machine.\
-					Negative ones means, that machine needs to be filled.Outputs shows current stored amounts of mats."
+	desc = "This circuit is designed for automatic storage and distribution of materials."
+	extended_desc = "The first input takes a ref of a machine with a material container. \
+					Second input is used for inserting material stacks into the internal material storage. \
+					Inputs 3-13 are used to transfer materials between target machine and circuit storage. \
+					Positive values will take that number of materials from another machine. \
+					Negative values will fill another machine from internal storage. Outputs show current stored amounts of mats."
 	icon_state = "grabber"
 	complexity = 16
 	inputs = list(
@@ -582,10 +628,10 @@
 				activate_pin(3)
 			else
 				activate_pin(4)
-		if(4)
-			AfterMaterialInsert()
+		if(5)
 			set_pin_data(IC_OUTPUT, 1, WEAKREF(src))
-			activate_pin(5)
+			AfterMaterialInsert()
+			activate_pin(6)
 
 /obj/item/integrated_circuit/manipulation/matman/Destroy()
 	GET_COMPONENT(materials, /datum/component/material_container)

code/modules/integrated_electronics/subtypes/output.dm

@@ -56,7 +56,7 @@
 
 /obj/item/integrated_circuit/output/screen/large/do_work()
 	..()
-	var/obj/O = assembly ? loc : assembly
+	var/obj/O = assembly ? get_turf(assembly) : loc
 	O.visible_message("<span class='notice'>[icon2html(O.icon, world, O.icon_state)]  [stuff_to_display]</span>")
 
 /obj/item/integrated_circuit/output/light

code/modules/integrated_electronics/subtypes/power.dm

@@ -75,9 +75,10 @@
 
 /obj/item/integrated_circuit/power/transmitter/large/do_work()
 	if(..()) // If the above code succeeds, do this below.
+		var/atom/movable/acting_object = get_object()
 		if(prob(20))
 			var/datum/effect_system/spark_spread/s = new /datum/effect_system/spark_spread
 			s.set_up(12, 1, src)
 			s.start()
-			visible_message("<span class='warning'>\The [assembly] makes some sparks!</span>")
+			acting_object.visible_message("<span class='warning'>\The [acting_object] makes some sparks!</span>")
 		return TRUE

code/modules/integrated_electronics/subtypes/reagents.dm

@@ -69,6 +69,34 @@
 			set_pin_data(IC_OUTPUT, 2, WEAKREF(src))
 			push_data()
 
+// Hydroponics trays have no reagents holder and handle reagents in their own snowflakey way.
+// This is a dirty hack to make injecting reagents into them work.
+// TODO: refactor that.
+/obj/item/integrated_circuit/reagent/proc/inject_tray(obj/machinery/hydroponics/tray, atom/movable/source, amount)
+	var/atom/movable/acting_object = get_object()
+	var/list/trays = list(tray)
+	var/visi_msg = "[acting_object] transfers fluid into [tray]"
+
+	if(amount > 30 && source.reagents.total_volume >= 30 && tray.using_irrigation)
+		trays = tray.FindConnected()
+		if (trays.len > 1)
+			visi_msg += ", setting off the irrigation system"
+
+	acting_object.visible_message("<span class='notice'>[visi_msg].</span>")
+	playsound(loc, 'sound/effects/slosh.ogg', 25, 1)
+
+	var/split = round(amount/trays.len)
+
+	for(var/obj/machinery/hydroponics/H in trays)
+		var/datum/reagents/temp_reagents = new /datum/reagents()
+		temp_reagents.my_atom = H
+
+		source.reagents.trans_to(temp_reagents, split)
+		H.applyChemicals(temp_reagents)
+
+		temp_reagents.clear_reagents()
+		qdel(temp_reagents)
+
 /obj/item/integrated_circuit/reagent/injector
 	name = "integrated hypo-injector"
 	desc = "This scary looking thing is able to pump liquids into whatever it's pointed at."
@@ -119,18 +147,6 @@
 		new_amount = CLAMP(new_amount, 0, volume)
 		transfer_amount = new_amount
 
-// Hydroponics trays have no reagents holder and handle reagents in their own snowflakey way.
-// This is a dirty hack to make injecting reagents into them work.
-// TODO: refactor that.
-/obj/item/integrated_circuit/reagent/proc/inject_tray(obj/machinery/hydroponics/tray, atom/movable/source, amount)
-	var/datum/reagents/temp_reagents = new /datum/reagents()
-	temp_reagents.my_atom = tray
-
-	source.reagents.trans_to(temp_reagents, amount)
-	tray.applyChemicals(temp_reagents)
-
-	temp_reagents.clear_reagents()
-	qdel(temp_reagents)
 
 /obj/item/integrated_circuit/reagent/injector/do_work(ord)
 	switch(ord)
@@ -150,7 +166,7 @@
 		return
 
 	if(!AM.reagents)
-		if(istype(AM, /obj/machinery/hydroponics) && direction_mode == SYRINGE_INJECT && reagents.total_volume)//injection into tray.
+		if(istype(AM, /obj/machinery/hydroponics) && direction_mode == SYRINGE_INJECT && reagents.total_volume && transfer_amount)//injection into tray.
 			inject_tray(AM, src, transfer_amount)
 			activate_pin(2)
 			return
@@ -186,11 +202,13 @@
 				activate_pin(3)
 				return
 			busy = FALSE
+
 		else
 			reagents.trans_to(AM, transfer_amount)
 
-	else
-		if(!AM.is_drawable() || reagents.total_volume >= reagents.maximum_volume)
+	if(direction_mode == SYRINGE_DRAW)
+		if(reagents.total_volume >= reagents.maximum_volume)
+			acting_object.visible_message("[acting_object] tries to draw from [AM], but the injector is full.")
 			activate_pin(3)
 			return
 
@@ -206,16 +224,23 @@
 					L.visible_message("<span class='danger'>[acting_object] takes a blood sample from [L]!</span>", \
 					"<span class='userdanger'>[acting_object] takes a blood sample from you!</span>")
 				else
+					L.visible_message("<span class='warning'>[acting_object] fails to take a blood sample from [L].</span>", \
+								"<span class='userdanger'>[acting_object] fails to take a blood sample from you!</span>")
 					busy = FALSE
 					activate_pin(3)
 					return
 			busy = FALSE
+
 		else
-			tramount = min(tramount, AM.reagents.total_volume)
 			if(!AM.reagents.total_volume)
+				acting_object.visible_message("<span class='notice'>[acting_object] tries to draw from [AM], but it is empty!</span>")
 				activate_pin(3)
 				return
 
+			if(!AM.is_drawable())
+				activate_pin(3)
+				return
+			tramount = min(tramount, AM.reagents.total_volume)
 			AM.reagents.trans_to(src, tramount)
 	activate_pin(2)
 

code/modules/integrated_electronics/subtypes/smart.dm

@@ -73,9 +73,9 @@
 
 /obj/item/integrated_circuit/smart/advanced_pathfinder
 	name = "advanced pathfinder"
-	desc = "This complex circuit using complex processor for path planning."
-	extended_desc = "This circuit uses global coordinates for target. It will count as obstacle turf with given ref.Passkey\
-	is the same as used in door remotes."
+	desc = "This circuit uses a complex processor for long-range pathfinding."
+	extended_desc = "This circuit uses absolute coordinates for target. A path will be generated taking obstacle input into account, \
+	pathing around any instances of said input. The passkey provided from a card reader is used to create a valid path through doorways."
 	icon_state = "numberpad"
 	complexity = 40
 	cooldown_per_use = 50
@@ -100,7 +100,8 @@
 	var/list/Pl = json_decode(XorEncrypt(hextostr(Ps, TRUE), SScircuit.cipherkey))
 	if(Pl&&islist(Pl))
 		idc.access = Pl
-	var/list/P = cir_get_path_to(assembly, locate(get_pin_data(IC_INPUT, 1),get_pin_data(IC_INPUT, 2),assembly.z), /turf/proc/Distance_cardinal, 0, 200, id=idc, exclude=get_turf(get_pin_data_as_type(IC_INPUT,3, /atom)), simulated_only = 0)
+	var/turf/a_loc = get_turf(assembly)
+	var/list/P = cir_get_path_to(assembly, locate(get_pin_data(IC_INPUT, 1),get_pin_data(IC_INPUT, 2),a_loc.z), /turf/proc/Distance_cardinal, 0, 200, id=idc, exclude=get_turf(get_pin_data_as_type(IC_INPUT,3, /atom)), simulated_only = 0)
 
 	if(!P)
 		activate_pin(3)

code/modules/mob/living/carbon/examine.dm

@@ -108,3 +108,4 @@
 	msg += "*---------*</span>"
 
 	to_chat(user, msg)
+	return msg

code/modules/mob/living/carbon/human/examine.dm

@@ -318,6 +318,7 @@
 	msg += "*---------*</span>"
 
 	to_chat(user, msg)
+	return msg
 
 /mob/living/proc/status_effect_examines(pronoun_replacement) //You can include this in any mob's examine() to show the examine texts of status effects!
 	var/list/dat = list()

code/modules/mob/living/silicon/ai/examine.dm

@@ -22,5 +22,5 @@
 	msg += "*---------*</span>"
 
 	to_chat(user, msg)
-
-	..()
+	..()
+	return msg

code/modules/mob/living/silicon/robot/examine.dm

@@ -51,5 +51,5 @@
 	msg += "*---------*</span>"
 
 	to_chat(user, msg)
-
 	..()
+	return msg