Merge branch 'master' into FERMICHEMCurTweaks

code/modules/surgery/advanced/brainwashing.dm

@@ -56,7 +56,7 @@
 		display_results(user, target, "<span class='warning'>You screw up, bruising the brain tissue!</span>",
 			"<span class='warning'>[user] screws up, causing brain damage!</span>",
 			"[user] completes the surgery on [target]'s brain.")
-		target.adjustBrainLoss(40)
+		target.adjustOrganLoss(ORGAN_SLOT_BRAIN, 40)
 	else
 		user.visible_message("<span class='warning'>[user] suddenly notices that the brain [user.p_they()] [user.p_were()] working on is not there anymore.", "<span class='warning'>You suddenly notice that the brain you were working on is not there anymore.</span>")
 	return FALSE

code/modules/surgery/advanced/lobotomy.dm

@@ -51,11 +51,12 @@
 	return TRUE
 
 /datum/surgery_step/lobotomize/failure(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
-	if(target.getorganslot(ORGAN_SLOT_BRAIN))
+	var/obj/item/organ/brain/B = target.getorganslot(ORGAN_SLOT_BRAIN)
+	if(B)
 		display_results(user, target, "<span class='warning'>You remove the wrong part, causing more damage!</span>",
 			"[user] successfully lobotomizes [target]!",
 			"[user] completes the surgery on [target]'s brain.")
-		target.adjustBrainLoss(80)
+		B.applyOrganDamage(80)
 		switch(rand(1,3))
 			if(1)
 				target.gain_trauma_type(BRAIN_TRAUMA_MILD, TRAUMA_RESILIENCE_MAGIC)

code/modules/surgery/advanced/revival.dm

@@ -63,7 +63,7 @@
 		user.visible_message("...[target] wakes up, alive and aware!", "<span class='notice'><b>IT'S ALIVE!</b></span>")
 		target.visible_message("...[target] wakes up, alive and aware!")
 		target.emote("gasp")
-		target.adjustBrainLoss(50, 199) //MAD SCIENCE
+		target.adjustOrganLoss(ORGAN_SLOT_BRAIN, 50, 199) //MAD SCIENCE
 		return TRUE
 	else
 		user.visible_message("...[target.p_they()] convulses, then lies still.")
@@ -75,5 +75,5 @@
 		"[user] send a powerful shock to [target]'s brain with [tool], but [target.p_they()] doesn't react.",
 		"[user] send a powerful shock to [target]'s brain with [tool], but [target.p_they()] doesn't react.")
 	playsound(get_turf(target), 'sound/magic/lightningbolt.ogg', 50, 1)
-	target.adjustBrainLoss(15, 199)
+	target.adjustOrganLoss(ORGAN_SLOT_BRAIN, 15, 199)
 	return FALSE

code/modules/surgery/brain_surgery.dm

@@ -31,7 +31,7 @@
 		"[user] completes the surgery on [target]'s brain.")
 	if(target.mind && target.mind.has_antag_datum(/datum/antagonist/brainwashed))
 		target.mind.remove_antag_datum(/datum/antagonist/brainwashed)
-	target.adjustBrainLoss(-60)
+	target.setOrganLoss(ORGAN_SLOT_BRAIN, target.getOrganLoss(ORGAN_SLOT_BRAIN) - 60)	//we set damage in this case in order to clear the "failing" flag
 	target.cure_all_traumas(TRAUMA_RESILIENCE_SURGERY)
 	return TRUE
 
@@ -40,7 +40,7 @@
 		display_results(user, target, "<span class='warning'>You screw up, causing more damage!</span>",
 			"<span class='warning'>[user] screws up, causing brain damage!</span>",
 			"[user] completes the surgery on [target]'s brain.")
-		target.adjustBrainLoss(60)
+		target.adjustOrganLoss(ORGAN_SLOT_BRAIN, 60)
 		target.gain_trauma_type(BRAIN_TRAUMA_SEVERE, TRAUMA_RESILIENCE_LOBOTOMY)
 	else
 		user.visible_message("<span class='warning'>[user] suddenly notices that the brain [user.p_they()] [user.p_were()] working on is not there anymore.", "<span class='warning'>You suddenly notice that the brain you were working on is not there anymore.</span>")

code/modules/surgery/coronary_bypass.dm

@@ -0,0 +1,77 @@
+/datum/surgery/coronary_bypass
+	name = "Coronary Bypass"
+	steps = list(/datum/surgery_step/incise, /datum/surgery_step/retract_skin, /datum/surgery_step/saw, /datum/surgery_step/clamp_bleeders,
+				 /datum/surgery_step/incise_heart, /datum/surgery_step/coronary_bypass, /datum/surgery_step/close)
+	possible_locs = list(BODY_ZONE_CHEST)
+
+/datum/surgery/coronary_bypass/can_start(mob/user, mob/living/carbon/target)
+	var/obj/item/organ/heart/H = target.getorganslot(ORGAN_SLOT_HEART)
+	if(H)
+		if(H.damage > 60 && !H.operated)
+			return TRUE
+	return FALSE
+
+
+//an incision but with greater bleed, and a 90% base success chance
+/datum/surgery_step/incise_heart
+	name = "incise heart"
+	implements = list(/obj/item/scalpel = 90, /obj/item/melee/transforming/energy/sword = 45, /obj/item/kitchen/knife = 45,
+		/obj/item/shard = 25)
+	time = 16
+
+/datum/surgery_step/incise_heart/preop(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	display_results(user, target, "<span class='notice'>You begin to make an incision in [target]'s heart...</span>",
+		"[user] begins to make an incision in [target]'s heart.",
+		"[user] begins to make an incision in [target]'s heart.")
+
+/datum/surgery_step/incise_heart/success(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	if(ishuman(target))
+		var/mob/living/carbon/human/H = target
+		if (!(NOBLOOD in H.dna.species.species_traits))
+			display_results(user, target, "<span class='notice'>Blood pools around the incision in [H]'s heart.</span>",
+				"Blood pools around the incision in [H]'s heart.",
+				"")
+			H.bleed_rate += 10
+			H.adjustBruteLoss(10)
+	return TRUE
+
+/datum/surgery_step/incise_heart/failure(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	if(ishuman(target))
+		var/mob/living/carbon/human/H = target
+		display_results(user, target, "<span class='warning'>You screw up, cutting too deeply into the heart!</span>",
+			"<span class='warning'>[user] screws up, causing blood to spurt out of [H]'s chest!</span>",
+			"<span class='warning'>[user] screws up, causing blood to spurt out of [H]'s chest!</span>")
+		H.bleed_rate += 20
+		H.adjustOrganLoss(ORGAN_SLOT_HEART, 10)
+		H.adjustBruteLoss(10)
+
+//grafts a coronary bypass onto the individual's heart, success chance is 90% base again
+/datum/surgery_step/coronary_bypass
+	name = "graft coronary bypass"
+	implements = list(/obj/item/hemostat = 90, TOOL_WIRECUTTER = 35, /obj/item/stack/packageWrap = 15, /obj/item/stack/cable_coil = 5)
+	time = 90
+
+/datum/surgery_step/coronary_bypass/preop(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	display_results(user, target, "<span class='notice'>You begin to graft a bypass onto [target]'s heart...</span>",
+			"[user] begins to graft something onto [target]'s heart!",
+			"[user] begins to graft something onto [target]'s heart!")
+
+/datum/surgery_step/coronary_bypass/success(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	target.setOrganLoss(ORGAN_SLOT_HEART, 60)
+	var/obj/item/organ/heart/heart = target.getorganslot(ORGAN_SLOT_HEART)
+	if(heart)	//slightly worrying if we lost our heart mid-operation, but that's life
+		heart.operated = TRUE
+	display_results(user, target, "<span class='notice'>You successfully graft a bypass onto [target]'s heart.</span>",
+			"[user] finishes grafting something onto [target]'s heart.",
+			"[user] finishes grafting something onto [target]'s heart.")
+	return TRUE
+
+/datum/surgery_step/coronary_bypass/failure(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	if(ishuman(target))
+		var/mob/living/carbon/human/H = target
+		display_results(user, target, "<span class='warning'>You screw up in attaching the graft, and it tears off, tearing part of the heart!</span>",
+			"<span class='warning'>[user] screws up, causing blood to spurt out of [H]'s chest profusely!</span>",
+			"<span class='warning'>[user] screws up, causing blood to spurt out of [H]'s chest profusely!</span>")
+		H.adjustOrganLoss(ORGAN_SLOT_HEART, 20)
+		H.bleed_rate += 30
+	return FALSE

code/modules/surgery/eye_surgery.dm

@@ -37,7 +37,7 @@
 		display_results(user, target, "<span class='warning'>You accidentally stab [target] right in the brain!</span>",
 			"<span class='warning'>[user] accidentally stabs [target] right in the brain!</span>",
 			"<span class='warning'>[user] accidentally stabs [target] right in the brain!</span>")
-		target.adjustBrainLoss(70)
+		target.adjustOrganLoss(ORGAN_SLOT_BRAIN, 70)
 	else
 		display_results(user, target, "<span class='warning'>You accidentally stab [target] right in the brain! Or would have, if [target] had a brain.</span>",
 			"<span class='warning'>[user] accidentally stabs [target] right in the brain! Or would have, if [target] had a brain.</span>",

code/modules/surgery/graft_synthtissue.dm

@@ -0,0 +1,70 @@
+//Organ reconstruction, limited to the chest region as most organs in the head have their own repair method (eyes/brain). We require synthflesh for these
+//steps since fixing internal organs aren't as simple as mending exterior flesh, though in the future it would be neat to add more chems to the viable list.
+//TBD: Add heart damage, have heart reconstruction seperate from organ reconstruction, and find a better name for this. I can imagine people getting it confused with manipulation.
+
+/datum/surgery/graft_synthtissue
+	name = "Graft synthtissue"
+	species = list(/mob/living/carbon/human, /mob/living/carbon/monkey)
+	possible_locs = list(BODY_ZONE_CHEST, BODY_ZONE_PRECISE_GROIN, BODY_ZONE_PRECISE_EYES)
+	steps = list(
+	/datum/surgery_step/incise,
+	/datum/surgery_step/retract_skin,
+	/datum/surgery_step/saw,
+	/datum/surgery_step/clamp_bleeders,
+	/datum/surgery_step/incise,
+	/datum/surgery_step/graft_synthtissue,
+	/datum/surgery_step/close
+	)
+
+//repair organs
+/datum/surgery_step/graft_synthtissue
+	name = "graft synthtissue"
+	implements = list(/obj/item/hemostat = 100, TOOL_SCREWDRIVER = 35, /obj/item/pen = 15)
+	repeatable = TRUE
+	time = 75
+	chems_needed = list("synthtissue")
+	var/obj/item/organ/chosen_organ
+	var/health_restored = 10
+
+/datum/surgery_step/graft_synthtissue/preop(mob/user, mob/living/carbon/human/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	if(implement_type in implements)
+		var/list/organs = target.getorganszone(target_zone)
+		if(!organs.len)
+			to_chat(user, "<span class='notice'>There are no targetable organs in [target]'s [parse_zone(target_zone)]!</span>")
+			return -1
+		else
+			for(var/obj/item/organ/O in organs)
+				O.on_find(user)
+				organs -= O
+				organs[O.name] = O
+			chosen_organ = input("Target which organ?", "Surgery", null, null) as null|anything in organs
+			chosen_organ = organs[chosen_organ]
+			if(!chosen_organ)
+				return -1
+			if(!target.reagents.has_reagent("synthtissue"))
+				to_chat(user, "<span class='notice'>There's no synthtissue available for use on [chosen_organ]</span>")
+				return -1
+			var/datum/reagent/synthtissue/Sf = locate(/datum/reagent/synthtissue) in target.reagents.reagent_list
+			if(Sf.volume < 10)
+				to_chat(user, "<span class='notice'>There's not enough synthtissue to perform the operation! There needs to be at least 10u.</span>")
+				return -1
+
+			if((chosen_organ.organ_flags & ORGAN_FAILING) && !(Sf.data["grown_volume"] >= 115))
+				to_chat(user, "<span class='notice'>[chosen_organ] is too damaged to graft onto!</span>")
+				return -1
+
+			if(health_restored != 10)
+				health_restored = 10
+			health_restored += (Sf.data["grown_volume"]/10)
+
+	user.visible_message("[user] begins to graft synthtissue onto [chosen_organ].</span>")
+	target.reagents.remove_reagent("synthtissue", 10)
+
+/datum/surgery_step/graft_synthtissue/success(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	user.visible_message("[user] successfully repairs part of [chosen_organ].", "<span class='notice'>You succeed in repairing parts of [chosen_organ].</span>")
+	chosen_organ.applyOrganDamage(health_restored)
+
+/datum/surgery_step/graft_synthtissue/failure(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	user.visible_message("<span class='warning'>[user] accidentally damages part of [chosen_organ]!</span>", "<span class='warning'>You damage [chosen_organ]! Apply more synthtissue if it's run out.</span>")
+	chosen_organ.applyOrganDamage(10)
+	return FALSE

code/modules/surgery/lobectomy.dm

@@ -0,0 +1,46 @@
+/datum/surgery/lobectomy
+	name = "Lobectomy"	//not to be confused with lobotomy
+	steps = list(/datum/surgery_step/incise, /datum/surgery_step/retract_skin, /datum/surgery_step/saw, /datum/surgery_step/clamp_bleeders,
+				 /datum/surgery_step/lobectomy, /datum/surgery_step/close)
+	possible_locs = list(BODY_ZONE_CHEST)
+
+/datum/surgery/lobectomy/can_start(mob/user, mob/living/carbon/target)
+	var/obj/item/organ/lungs/L = target.getorganslot(ORGAN_SLOT_LUNGS)
+	if(L)
+		if(L.damage > 60 && !L.operated)
+			return TRUE
+	return FALSE
+
+
+//lobectomy, removes the most damaged lung lobe with a 95% base success chance
+/datum/surgery_step/lobectomy
+	name = "excise damaged lung node"
+	implements = list(/obj/item/scalpel = 95, /obj/item/melee/transforming/energy/sword = 65, /obj/item/kitchen/knife = 45,
+		/obj/item/shard = 35)
+	time = 42
+
+/datum/surgery_step/lobectomy/preop(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	display_results(user, target, "<span class='notice'>You begin to make an incision in [target]'s lungs...</span>",
+		"[user] begins to make an incision in [target].",
+		"[user] begins to make an incision in [target].")
+
+/datum/surgery_step/lobectomy/success(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	if(ishuman(target))
+		var/mob/living/carbon/human/H = target
+		var/obj/item/organ/lungs/L = H.getorganslot(ORGAN_SLOT_LUNGS)
+		L.operated = TRUE
+		H.setOrganLoss(ORGAN_SLOT_LUNGS, 60)
+		display_results(user, target, "<span class='notice'>You successfully excise [H]'s most damaged lobe.</span>",
+			"Successfully removes a piece of [H]'s lungs.",
+			"")
+	return TRUE
+
+/datum/surgery_step/lobectomy/failure(mob/user, mob/living/carbon/target, target_zone, obj/item/tool, datum/surgery/surgery)
+	if(ishuman(target))
+		var/mob/living/carbon/human/H = target
+		display_results(user, target, "<span class='warning'>You screw up, failing to excise [H]'s damaged lobe!</span>",
+			"<span class='warning'>[user] screws up!</span>",
+			"<span class='warning'>[user] screws up!</span>")
+		H.losebreath += 4
+		H.adjustOrganLoss(ORGAN_SLOT_LUNGS, 10)
+	return FALSE

code/modules/surgery/organs/appendix.dm

@@ -3,7 +3,21 @@
 	icon_state = "appendix"
 	zone = BODY_ZONE_PRECISE_GROIN
 	slot = ORGAN_SLOT_APPENDIX
-	var/inflamed = 0
+	healing_factor = STANDARD_ORGAN_HEALING
+	decay_factor = STANDARD_ORGAN_DECAY
+
+	now_failing = "<span class='warning'>An explosion of pain erupts in your lower right abdomen!</span>"
+	now_fixed = "<span class='info'>The pain in your abdomen has subsided.</span>"
+
+	var/inflamed
+
+/obj/item/organ/appendix/on_life()
+	..()
+	if(!(organ_flags & ORGAN_FAILING))
+		return
+	var/mob/living/carbon/M = owner
+	if(M)
+		M.adjustToxLoss(4, TRUE, TRUE)	//forced to ensure people don't use it to gain tox as slime person
 
 /obj/item/organ/appendix/update_icon()
 	if(inflamed)
@@ -16,7 +30,7 @@
 /obj/item/organ/appendix/Remove(mob/living/carbon/M, special = 0)
 	for(var/datum/disease/appendicitis/A in M.diseases)
 		A.cure()
-		inflamed = 1
+		inflamed = TRUE
 	update_icon()
 	..()
 

code/modules/surgery/organs/augments_arms.dm

@@ -121,7 +121,7 @@
 	playsound(get_turf(owner), 'sound/mecha/mechmove03.ogg', 50, 1)
 
 /obj/item/organ/cyberimp/arm/ui_action_click()
-	if(crit_fail || (!holder && !contents.len))
+	if(crit_fail || (organ_flags & ORGAN_FAILING) || (!holder && !contents.len))
 		to_chat(owner, "<span class='warning'>The implant doesn't respond. It seems to be broken...</span>")
 		return
 
@@ -145,7 +145,7 @@
 	. = ..()
 	if(. & EMP_PROTECT_SELF)
 		return
-	if(prob(30/severity) && owner && !crit_fail)
+	if(prob(30/severity) && owner && !(organ_flags & ORGAN_FAILING))
 		Retract()
 		owner.visible_message("<span class='danger'>A loud bang comes from [owner]\'s [zone == BODY_ZONE_R_ARM ? "right" : "left"] arm!</span>")
 		playsound(get_turf(owner), 'sound/weapons/flashbang.ogg', 100, 1)
@@ -154,6 +154,7 @@
 		owner.IgniteMob()
 		owner.adjustFireLoss(25)
 		crit_fail = 1
+		organ_flags |= ORGAN_FAILING
 
 
 /obj/item/organ/cyberimp/arm/gun/laser

code/modules/surgery/organs/augments_chest.dm

@@ -144,7 +144,7 @@
 
 /obj/item/organ/cyberimp/chest/thrusters/proc/toggle(silent = FALSE)
 	if(!on)
-		if(crit_fail)
+		if(crit_fail || (organ_flags & ORGAN_FAILING))
 			if(!silent)
 				to_chat(owner, "<span class='warning'>Your thrusters set seems to be broken!</span>")
 			return 0

code/modules/surgery/organs/augments_internal.dm

@@ -4,6 +4,7 @@
 	name = "cybernetic implant"
 	desc = "A state-of-the-art implant that improves a baseline's functionality."
 	status = ORGAN_ROBOTIC
+	organ_flags = ORGAN_SYNTHETIC
 	var/implant_color = "#FFFFFF"
 	var/implant_overlay
 	var/syndicate_implant = FALSE //Makes the implant invisible to health analyzers and medical HUDs.
@@ -102,7 +103,7 @@
 
 /obj/item/organ/cyberimp/brain/anti_stun/on_life()
 	..()
-	if(crit_fail)
+	if(crit_fail || !(organ_flags & ORGAN_FAILING))
 		return
 	owner.adjustStaminaLoss(-3.5) //Citadel edit, makes it more useful in Stamina based combat
 	if(owner.AmountStun() > STUN_SET_AMOUNT)
@@ -112,13 +113,15 @@
 
 /obj/item/organ/cyberimp/brain/anti_stun/emp_act(severity)
 	. = ..()
-	if(crit_fail || . & EMP_PROTECT_SELF)
+	if(crit_fail || (organ_flags & ORGAN_FAILING) || . & EMP_PROTECT_SELF)
 		return
 	crit_fail = TRUE
+	organ_flags |= ORGAN_FAILING
 	addtimer(CALLBACK(src, .proc/reboot), 90 / severity)
 
 /obj/item/organ/cyberimp/brain/anti_stun/proc/reboot()
 	crit_fail = FALSE
+	organ_flags &= ~ORGAN_FAILING
 
 
 //[[[[MOUTH]]]]

code/modules/surgery/organs/ears.dm

@@ -6,6 +6,14 @@
 	slot = ORGAN_SLOT_EARS
 	gender = PLURAL
 
+	healing_factor = STANDARD_ORGAN_HEALING
+	decay_factor = STANDARD_ORGAN_DECAY
+
+	low_threshold_passed = "<span class='info'>Your ears begin to resonate with an internal ring sometimes.</span>"
+	now_failing = "<span class='warning'>You are unable to hear at all!</span>"
+	now_fixed = "<span class='info'>Noise slowly begins filling your ears once more.</span>"
+	low_threshold_cleared = "<span class='info'>The ringing in your ears has died down.</span>"
+
 	// `deaf` measures "ticks" of deafness. While > 0, the person is unable
 	// to hear anything.
 	var/deaf = 0
@@ -23,17 +31,26 @@
 /obj/item/organ/ears/on_life()
 	if(!iscarbon(owner))
 		return
+	..()
 	var/mob/living/carbon/C = owner
+	if((damage < maxHealth) && (organ_flags & ORGAN_FAILING))	//ear damage can be repaired from the failing condition
+		organ_flags &= ~ORGAN_FAILING
 	// genetic deafness prevents the body from using the ears, even if healthy
 	if(HAS_TRAIT(C, TRAIT_DEAF))
 		deaf = max(deaf, 1)
-	else if(ear_damage < UNHEALING_EAR_DAMAGE) // if higher than UNHEALING_EAR_DAMAGE, no natural healing occurs.
-		ear_damage = max(ear_damage - 0.05, 0)
+	else if(!(organ_flags & ORGAN_FAILING)) // if this organ is failing, do not clear deaf stacks.
 		deaf = max(deaf - 1, 0)
+		if(prob(damage / 20) && (damage > low_threshold))
+			adjustEarDamage(0, 4)
+			SEND_SOUND(C, sound('sound/weapons/flash_ring.ogg'))
+			to_chat(C, "<span class='warning'>The ringing in your ears grows louder, blocking out any external noises for a moment.</span>")
+	else if((organ_flags & ORGAN_FAILING) && (deaf == 0))
+		deaf = 1	//stop being not deaf you deaf idiot
 
 /obj/item/organ/ears/proc/restoreEars()
 	deaf = 0
 	ear_damage = 0
+	organ_flags &= ~ORGAN_FAILING
 
 	var/mob/living/carbon/C = owner
 
@@ -99,4 +116,23 @@
 	name = "tin ears"
 	desc = "The robust ears of a bronze golem. "
 	damage_multiplier = 0.1 //STRONK
-	bang_protect = 1 //Fear me weaklings. 
+	bang_protect = 1 //Fear me weaklings.
+
+/obj/item/organ/ears/cybernetic
+	name = "cybernetic ears"
+	icon_state = "ears-c"
+	desc = "a basic cybernetic designed to mimic the operation of ears."
+	damage_multiplier = 0.9
+	organ_flags = ORGAN_SYNTHETIC
+
+/obj/item/organ/ears/cybernetic/upgraded
+	name = "upgraded cybernetic ears"
+	icon_state = "ears-c-u"
+	desc = "an advanced cybernetic ear, surpassing the performance of organic ears"
+	damage_multiplier = 0.5
+
+/obj/item/organ/ears/cybernetic/emp_act(severity)
+	. = ..()
+	if(. & EMP_PROTECT_SELF)
+		return
+	damage += 40/severity

code/modules/surgery/organs/eyes.dm

@@ -6,6 +6,19 @@
 	slot = ORGAN_SLOT_EYES
 	gender = PLURAL
 
+	healing_factor = STANDARD_ORGAN_HEALING
+	decay_factor = STANDARD_ORGAN_DECAY
+	maxHealth = 0.5 * STANDARD_ORGAN_THRESHOLD		//half the normal health max since we go blind at 30, a permanent blindness at 50 therefore makes sense unless medicine is administered
+	high_threshold = 0.3 * STANDARD_ORGAN_THRESHOLD	//threshold at 30
+	low_threshold = 0.15 * STANDARD_ORGAN_THRESHOLD	//threshold at 15
+
+	low_threshold_passed = "<span class='info'>Distant objects become somewhat less tangible.</span>"
+	high_threshold_passed = "<span class='info'>Everything starts to look a lot less clear.</span>"
+	now_failing = "<span class='warning'>Darkness envelopes you, as your eyes go blind!</span>"
+	now_fixed = "<span class='info'>Color and shapes are once again perceivable.</span>"
+	high_threshold_cleared = "<span class='info'>Your vision functions passably once more.</span>"
+	low_threshold_cleared = "<span class='info'>Your vision is cleared of any ailment.</span>"
+
 	var/sight_flags = 0
 	var/see_in_dark = 2
 	var/eye_damage = 0
@@ -15,9 +28,12 @@
 	var/flash_protect = 0
 	var/see_invisible = SEE_INVISIBLE_LIVING
 	var/lighting_alpha
+	var/damaged	= FALSE	//damaged indicates that our eyes are undergoing some level of negative effect
 
 /obj/item/organ/eyes/Insert(mob/living/carbon/M, special = FALSE, drop_if_replaced = FALSE)
 	..()
+	if(damage == initial(damage))
+		clear_eye_trauma()
 	if(ishuman(owner))
 		var/mob/living/carbon/human/HMN = owner
 		old_eye_color = HMN.eye_color
@@ -32,7 +48,9 @@
 	M.update_tint()
 	owner.update_sight()
 
+
 /obj/item/organ/eyes/Remove(mob/living/carbon/M, special = 0)
+	clear_eye_trauma()
 	..()
 	if(ishuman(M) && eye_color)
 		var/mob/living/carbon/human/HMN = M
@@ -41,6 +59,34 @@
 	M.update_tint()
 	M.update_sight()
 
+/obj/item/organ/eyes/on_life()
+	..()
+	var/mob/living/carbon/C = owner
+	//since we can repair fully damaged eyes, check if healing has occurred
+	if((organ_flags & ORGAN_FAILING) && (damage < maxHealth))
+		organ_flags &= ~ORGAN_FAILING
+		C.cure_blind(EYE_DAMAGE)
+	//various degrees of "oh fuck my eyes", from "point a laser at your eye" to "staring at the Sun" intensities
+	if(damage > 20)
+		damaged = TRUE
+		if(organ_flags & ORGAN_FAILING)
+			C.become_blind(EYE_DAMAGE)
+		else if(damage > 30)
+			C.overlay_fullscreen("eye_damage", /obj/screen/fullscreen/impaired, 2)
+		else
+			C.overlay_fullscreen("eye_damage", /obj/screen/fullscreen/impaired, 1)
+	//called once since we don't want to keep clearing the screen of eye damage for people who are below 20 damage
+	else if(damaged)
+		damaged = FALSE
+		C.clear_fullscreen("eye_damage")
+	return
+
+/obj/item/organ/eyes/proc/clear_eye_trauma()
+	var/mob/living/carbon/C = owner
+	C.clear_fullscreen("eye_damage")
+	C.cure_blind(EYE_DAMAGE)
+	damaged = FALSE
+
 /obj/item/organ/eyes/night_vision
 	name = "shadow eyes"
 	desc = "A spooky set of eyes that can see in the dark."
@@ -88,15 +134,17 @@
 	icon_state = "cybernetic_eyeballs"
 	desc = "Your vision is augmented."
 	status = ORGAN_ROBOTIC
+	organ_flags = ORGAN_SYNTHETIC
 
 /obj/item/organ/eyes/robotic/emp_act(severity)
 	. = ..()
 	if(!owner || . & EMP_PROTECT_SELF)
 		return
-	if(prob(10 * severity))
-		return
 	to_chat(owner, "<span class='warning'>Static obfuscates your vision!</span>")
 	owner.flash_act(visual = 1)
+	if(severity == EMP_HEAVY)
+		owner.adjustOrganLoss(ORGAN_SLOT_EYES, 20)
+
 
 /obj/item/organ/eyes/robotic/xray
 	name = "\improper X-ray eyes"
@@ -137,7 +185,7 @@
 	M.become_blind("flashlight_eyes")
 
 
-/obj/item/organ/eyes/robotic/flashlight/Remove(var/mob/living/carbon/M, var/special = 0)
+/obj/item/organ/eyes/robotic/flashlight/Remove(var/mob/living/carbon/M, special = FALSE)
 	eye.on = FALSE
 	eye.update_brightness(M)
 	eye.forceMove(src)

code/modules/surgery/organs/heart.dm

@@ -4,12 +4,24 @@
 	icon_state = "heart-on"
 	zone = BODY_ZONE_CHEST
 	slot = ORGAN_SLOT_HEART
+
+	healing_factor = STANDARD_ORGAN_HEALING
+	decay_factor = 4 * STANDARD_ORGAN_DECAY		//designed to fail about 5 minutes after death
+
+	low_threshold_passed = "<span class='info'>Prickles of pain appear then die out from within your chest...</span>"
+	high_threshold_passed = "<span class='warning'>Something inside your chest hurts, and the pain isn't subsiding. You notice yourself breathing far faster than before.</span>"
+	now_fixed = "<span class='info'>Your heart begins to beat again.</span>"
+	high_threshold_cleared = "<span class='info'>The pain in your chest has died down, and your breathing becomes more relaxed.</span>"
+
 	// Heart attack code is in code/modules/mob/living/carbon/human/life.dm
 	var/beating = 1
 	var/icon_base = "heart"
 	attack_verb = list("beat", "thumped")
 	var/beat = BEAT_NONE//is this mob having a heatbeat sound played? if so, which?
 
+	var/failed = FALSE		//to prevent constantly running failing code
+	var/operated = FALSE	//whether the heart's been operated on to fix some of its damages
+
 /obj/item/organ/heart/update_icon()
 	if(beating)
 		icon_state = "[icon_base]-on"
@@ -50,6 +62,7 @@
 
 /obj/item/organ/heart/on_life()
 	if(owner.client && beating)
+		failed = FALSE
 		var/sound/slowbeat = sound('sound/health/slowbeat.ogg', repeat = TRUE)
 		var/sound/fastbeat = sound('sound/health/fastbeat.ogg', repeat = TRUE)
 		var/mob/living/carbon/H = owner
@@ -70,11 +83,18 @@
 			H.stop_sound_channel(CHANNEL_HEARTBEAT)
 			beat = BEAT_NONE
 
+	if(organ_flags & ORGAN_FAILING)	//heart broke, stopped beating, death imminent
+		if(owner.stat == CONSCIOUS)
+			owner.visible_message("<span class='userdanger'>[owner] clutches at [owner.p_their()] chest as if [owner.p_their()] heart is stopping!</span>")
+		owner.set_heartattack(TRUE)
+		failed = TRUE
+
 /obj/item/organ/heart/cursed
 	name = "cursed heart"
 	desc = "A heart that, when inserted, will force you to pump it manually."
 	icon_state = "cursedheart-off"
 	icon_base = "cursedheart"
+	decay_factor = 0
 	actions_types = list(/datum/action/item_action/organ_action/cursed_heart)
 	var/last_pump = 0
 	var/add_colour = TRUE //So we're not constantly recreating colour datums
@@ -153,18 +173,48 @@
 	name = "cybernetic heart"
 	desc = "An electronic device designed to mimic the functions of an organic human heart. Offers no benefit over an organic heart other than being easy to make."
 	icon_state = "heart-c"
-	synthetic = TRUE
+	organ_flags = ORGAN_SYNTHETIC
 
-/obj/item/organ/heart/cybernetic/emp_act()
+/obj/item/organ/heart/cybernetic/emp_act(severity)
 	. = ..()
 	if(. & EMP_PROTECT_SELF)
 		return
 	Stop()
+	addtimer(CALLBACK(src, .proc/Restart), 20/severity SECONDS)
+	damage += 100/severity
+
+/obj/item/organ/heart/cybernetic/upgraded
+	name = "upgraded cybernetic heart"
+	desc = "An electronic device designed to mimic the functions of an organic human heart. Also holds an emergency dose of epinephrine, used automatically after facing severe trauma. This upgraded model can regenerate its dose after use."
+	icon_state = "heart-c-u"
+	maxHealth = 2 * STANDARD_ORGAN_THRESHOLD
+
+	//I put it on upgraded for now.
+	var/dose_available = TRUE
+	var/rid = /datum/reagent/medicine/epinephrine
+	var/ramount = 10
+
+obj/item/organ/heart/cybernetic/upgraded/on_life()
+	. = ..()
+	if(dose_available && owner.health <= owner.crit_threshold && !owner.reagents.has_reagent(rid))
+		owner.reagents.add_reagent(rid, ramount)
+		used_dose()
+	if(ramount < 10) //eats your nutrition to regen epinephrine
+		var/regen_amount = owner.nutrition/2000
+		owner.nutrition -= regen_amount
+		ramount += regen_amount
+
+/obj/item/organ/heart/cybernetic/upgraded/proc/used_dose()
+	. = ..()
+	addtimer(VARSET_CALLBACK(src, dose_available, TRUE), 5 MINUTES)
+	ramount = 0
+
+
 
 /obj/item/organ/heart/freedom
 	name = "heart of freedom"
 	desc = "This heart pumps with the passion to give... something freedom."
-	synthetic = TRUE //the power of freedom prevents heart attacks
+	organ_flags = ORGAN_SYNTHETIC //the power of freedom prevents heart attacks
 	var/min_next_adrenaline = 0
 
 /obj/item/organ/heart/freedom/on_life()

code/modules/surgery/organs/liver.dm

@@ -10,10 +10,13 @@
 	zone = BODY_ZONE_CHEST
 	slot = ORGAN_SLOT_LIVER
 	desc = "Pairing suggestion: chianti and fava beans."
-	var/damage = 0 //liver damage, 0 is no damage, damage=maxHealth causes liver failure
+
+	maxHealth = STANDARD_ORGAN_THRESHOLD
+	healing_factor = STANDARD_ORGAN_HEALING
+	decay_factor = STANDARD_ORGAN_DECAY
+
 	var/alcohol_tolerance = ALCOHOL_RATE//affects how much damage the liver takes from alcohol
 	var/failing //is this liver failing?
-	var/maxHealth = LIVER_DEFAULT_HEALTH
 	var/toxTolerance = LIVER_DEFAULT_TOX_TOLERANCE//maximum amount of toxins the liver can just shrug off
 	var/toxLethality = LIVER_DEFAULT_TOX_LETHALITY//affects how much damage toxins do to the liver
 	var/filterToxins = TRUE //whether to filter toxins
@@ -24,7 +27,7 @@
 	var/mob/living/carbon/C = owner
 
 	if(istype(C))
-		if(!failing)//can't process reagents with a failing liver
+		if(!(organ_flags & ORGAN_FAILING))//can't process reagents with a failing liver
 			//slowly heal liver damage
 			damage = max(0, damage - 0.1)
 
@@ -69,7 +72,7 @@
 	if(moveCalc == cachedmoveCalc)//reduce calculations
 		return
 	if(prob(5))
-		to_chat(owner, "<span class='notice'>You feel a stange ache in your side, almost like a sitch. This pain is affecting your movements and making you feel lightheaded.</span>")
+		to_chat(owner, "<span class='notice'>You feel a stange ache in your side, almost like a stitch. This pain is affecting your movements and making you feel lightheaded.</span>")
 	var/mob/living/carbon/human/H = owner
 	H.add_movespeed_modifier(LIVER_SWELLING_MOVE_MODIFY, TRUE, 100, NONE, override = TRUE, multiplicative_slowdown = moveCalc)
 	H.AdjustBloodVol(moveCalc/3)
@@ -97,14 +100,15 @@
 	name = "cybernetic liver"
 	icon_state = "liver-c"
 	desc = "An electronic device designed to mimic the functions of a human liver. It has no benefits over an organic liver, but is easy to produce."
-	synthetic = TRUE
+	organ_flags = ORGAN_SYNTHETIC
+	maxHealth = 1.1 * STANDARD_ORGAN_THRESHOLD
 
 /obj/item/organ/liver/cybernetic/upgraded
 	name = "upgraded cybernetic liver"
 	icon_state = "liver-c-u"
 	desc = "An upgraded version of the cybernetic liver, designed to improve upon organic livers. It is resistant to alcohol poisoning and is very robust at filtering toxins."
 	alcohol_tolerance = 0.001
-	maxHealth = 200 //double the health of a normal liver
+	maxHealth = 2 * STANDARD_ORGAN_THRESHOLD
 	toxTolerance = 15 //can shrug off up to 15u of toxins
 	toxLethality = 0.008 //20% less damage than a normal liver
 

code/modules/surgery/organs/lungs.dm

@@ -8,6 +8,19 @@
 	gender = PLURAL
 	w_class = WEIGHT_CLASS_NORMAL
 
+	var/failed = FALSE
+	var/operated = FALSE	//whether we can still have our damages fixed through surgery
+
+	//health
+	maxHealth = LUNGS_MAX_HEALTH
+
+	healing_factor = STANDARD_ORGAN_HEALING
+	decay_factor = STANDARD_ORGAN_DECAY
+
+	high_threshold_passed = "<span class='warning'>You feel some sort of constriction around your chest as your breathing becomes shallow and rapid.</span>"
+	now_fixed = "<span class='warning'>Your lungs seem to once again be able to hold air.</span>"
+	high_threshold_cleared = "<span class='info'>The constriction around your chest loosens as your breathing calms down.</span>"
+
 	//Breath damage
 
 	var/safe_oxygen_min = 16 // Minimum safe partial pressure of O2, in kPa
@@ -56,36 +69,35 @@
 
 	var/crit_stabilizing_reagent = "epinephrine"
 
-	//health
-	var/maxHealth = LUNGS_MAX_HEALTH
-	var/damage = 0
+
 
 //TODO: lung health affects lung function
-/obj/item/organ/lungs/proc/adjustLungLoss(damage_mod, mob/living/carbon/M) //damage might be too low atm.
+/obj/item/organ/lungs/onDamage(damage_mod) //damage might be too low atm.
+	var/cached_damage = damage
 	if (maxHealth == INFINITY)
 		return
-	if(damage+damage_mod < 0)
-		damage = 0
+	if(cached_damage+damage_mod < 0)
+		cached_damage = 0
 		return
 
-	damage += damage_mod
-	if ((damage / maxHealth) > 1)
-		to_chat(M, "<span class='userdanger'>You feel your lungs collapse within your chest as you gasp for air, unable to inflate them anymore!</span>")
-		M.emote("gasp")
+	cached_damage += damage_mod
+	if ((cached_damage/ maxHealth) > 1)
+		to_chat(owner, "<span class='userdanger'>You feel your lungs collapse within your chest as you gasp for air, unable to inflate them anymore!</span>")
+		owner.emote("gasp")
 		SSblackbox.record_feedback("tally", "fermi_chem", 1, "Lungs lost")
-		qdel(src)
-	else if ((damage / maxHealth) > 0.75)
-		to_chat(M, "<span class='warning'>It's getting really hard to breathe!!</span>")
-		M.emote("gasp")
-		M.Dizzy(3)
-	else if ((damage / maxHealth) > 0.5)
-		M.Dizzy(2)
-		to_chat(M, "<span class='notice'>Your chest is really starting to hurt.</span>")
-		M.emote("cough")
-	else if ((damage / maxHealth) > 0.2)
-		to_chat(M, "<span class='notice'>You feel an ache within your chest.</span>")
-		M.emote("cough")
-		M.Dizzy(1)
+		//qdel(src) - Handled elsewhere for now.
+	else if ((cached_damage / maxHealth) > 0.75)
+		to_chat(owner, "<span class='warning'>It's getting really hard to breathe!!</span>")
+		owner.emote("gasp")
+		owner.Dizzy(3)
+	else if ((cached_damage / maxHealth) > 0.5)
+		owner.Dizzy(2)
+		to_chat(owner, "<span class='notice'>Your chest is really starting to hurt.</span>")
+		owner.emote("cough")
+	else if ((cached_damage / maxHealth) > 0.2)
+		to_chat(owner, "<span class='notice'>You feel an ache within your chest.</span>")
+		owner.emote("cough")
+		owner.Dizzy(1)
 
 /obj/item/organ/lungs/proc/check_breath(datum/gas_mixture/breath, mob/living/carbon/human/H)
 //TODO: add lung damage = less oxygen gains
@@ -289,7 +301,7 @@
 			H.hallucination += 10
 			H.reagents.add_reagent("bz_metabolites",5)
 			if(prob(33))
-				H.adjustBrainLoss(3, 150)
+				H.adjustOrganLoss(ORGAN_SLOT_BRAIN, 3, 150)
 
 		else if(bz_pp > 0.01)
 			H.hallucination += 5
@@ -405,13 +417,13 @@
 		var/cold_modifier = H.dna.species.coldmod
 		if(breath_temperature < cold_level_3_threshold)
 			H.apply_damage_type(cold_level_3_damage*cold_modifier, cold_damage_type)
-			adjustLungLoss((cold_level_3_damage*cold_modifier*2), H)
+			H.adjustOrganLoss(ORGAN_SLOT_LUNGS, (cold_level_3_damage*cold_modifier*2))
 		if(breath_temperature > cold_level_3_threshold && breath_temperature < cold_level_2_threshold)
 			H.apply_damage_type(cold_level_2_damage*cold_modifier, cold_damage_type)
-			adjustLungLoss((cold_level_2_damage*cold_modifier*2), H)
+			H.adjustOrganLoss(ORGAN_SLOT_LUNGS, (cold_level_2_damage*cold_modifier*2))
 		if(breath_temperature > cold_level_2_threshold && breath_temperature < cold_level_1_threshold)
 			H.apply_damage_type(cold_level_1_damage*cold_modifier, cold_damage_type)
-			adjustLungLoss((cold_level_1_damage*cold_modifier*2), H)
+			H.adjustOrganLoss(ORGAN_SLOT_LUNGS, (cold_level_1_damage*cold_modifier*2))
 		if(breath_temperature < cold_level_1_threshold)
 			if(prob(20))
 				to_chat(H, "<span class='warning'>You feel [cold_message] in your [name]!</span>")
@@ -420,17 +432,29 @@
 		var/heat_modifier = H.dna.species.heatmod
 		if(breath_temperature > heat_level_1_threshold && breath_temperature < heat_level_2_threshold)
 			H.apply_damage_type(heat_level_1_damage*heat_modifier, heat_damage_type)
-			adjustLungLoss((heat_level_1_damage*heat_modifier*2), H)
+			H.adjustOrganLoss(ORGAN_SLOT_LUNGS, (heat_level_1_damage*heat_modifier*2))
 		if(breath_temperature > heat_level_2_threshold && breath_temperature < heat_level_3_threshold)
 			H.apply_damage_type(heat_level_2_damage*heat_modifier, heat_damage_type)
-			adjustLungLoss((heat_level_2_damage*heat_modifier*2), H)
+			H.adjustOrganLoss(ORGAN_SLOT_LUNGS, (heat_level_2_damage*heat_modifier*2))
 		if(breath_temperature > heat_level_3_threshold)
 			H.apply_damage_type(heat_level_3_damage*heat_modifier, heat_damage_type)
-			adjustLungLoss((heat_level_3_damage*heat_modifier*2), H)
+			H.adjustOrganLoss(ORGAN_SLOT_LUNGS, (heat_level_3_damage*heat_modifier*2))
 		if(breath_temperature > heat_level_1_threshold)
 			if(prob(20))
 				to_chat(H, "<span class='warning'>You feel [hot_message] in your [name]!</span>")
 
+
+/obj/item/organ/lungs/on_life()
+	..()
+	if((!failed) && ((organ_flags & ORGAN_FAILING)))
+		if(owner.stat == CONSCIOUS)
+			owner.visible_message("<span class='danger'>[owner] grabs [owner.p_their()] throat, struggling for breath!</span>", \
+								"<span class='userdanger'>You suddenly feel like you can't breathe!</span>")
+		failed = TRUE
+	else if(!(organ_flags & ORGAN_FAILING))
+		failed = FALSE
+	return
+
 /obj/item/organ/lungs/prepare_eat()
 	var/obj/S = ..()
 	S.reagents.add_reagent("salbutamol", 5)
@@ -451,14 +475,16 @@
 	name = "cybernetic lungs"
 	desc = "A cybernetic version of the lungs found in traditional humanoid entities. It functions the same as an organic lung and is merely meant as a replacement."
 	icon_state = "lungs-c"
-	synthetic = TRUE
+	organ_flags = ORGAN_SYNTHETIC
 	maxHealth = 400
+	safe_oxygen_min = 13
 
 /obj/item/organ/lungs/cybernetic/emp_act()
 	. = ..()
 	if(. & EMP_PROTECT_SELF)
 		return
 	owner.losebreath = 20
+	owner.adjustOrganLoss(ORGAN_SLOT_LUNGS, 25)
 
 
 /obj/item/organ/lungs/cybernetic/upgraded
@@ -495,8 +521,24 @@
 
 	safe_toxins_max = 0 //We breathe this to gain POWER.
 
+	cold_level_1_threshold = 285 // Remember when slimes used to be succeptable to cold? Well....
+	cold_level_2_threshold = 260
+	cold_level_3_threshold = 230
+
+	maxHealth = 250
+
 /obj/item/organ/lungs/slime/check_breath(datum/gas_mixture/breath, mob/living/carbon/human/H)
 	. = ..()
 	if (breath && breath.gases[/datum/gas/plasma])
 		var/plasma_pp = breath.get_breath_partial_pressure(breath.gases[/datum/gas/plasma])
 		owner.blood_volume += (0.2 * plasma_pp) // 10/s when breathing literally nothing but plasma, which will suffocate you.
+
+/obj/item/organ/lungs/yamerol
+	name = "Yamerol lungs"
+	desc = "A temporary pair of lungs made from self assembling yamerol molecules."
+	maxHealth = 200
+	color = "#68e83a"
+
+/obj/item/organ/lungs/yamerol/on_life()
+	..()
+	damage += 2 //Yamerol lungs are temporary

code/modules/surgery/organs/organ_internal.dm

@@ -1,3 +1,6 @@
+#define STANDARD_ORGAN_THRESHOLD 100
+#define STANDARD_ORGAN_HEALING 0.001
+
 /obj/item/organ
 	name = "organ"
 	icon = 'icons/obj/surgery.dmi'
@@ -8,11 +11,23 @@
 	var/zone = BODY_ZONE_CHEST
 	var/slot
 	// DO NOT add slots with matching names to different zones - it will break internal_organs_slot list!
-	var/vital = 0
-	//Was this organ implanted/inserted/etc, if true will not be removed during species change.
-	var/external = FALSE
-	var/synthetic = FALSE // To distinguish between organic and synthetic organs
+	var/organ_flags = 0
+	var/maxHealth = STANDARD_ORGAN_THRESHOLD
+	var/damage = 0		//total damage this organ has sustained
+	///Healing factor and decay factor function on % of maxhealth, and do not work by applying a static number per tick
+	var/healing_factor 	= 0										//fraction of maxhealth healed per on_life(), set to 0 for generic organs
+	var/decay_factor 	= 0										//same as above but when without a living owner, set to 0 for generic organs
+	var/high_threshold	= STANDARD_ORGAN_THRESHOLD * 0.45		//when severe organ damage occurs
+	var/low_threshold	= STANDARD_ORGAN_THRESHOLD * 0.1		//when minor organ damage occurs
 
+	///Organ variables for determining what we alert the owner with when they pass/clear the damage thresholds
+	var/prev_damage = 0
+	var/low_threshold_passed
+	var/high_threshold_passed
+	var/now_failing
+	var/now_fixed
+	var/high_threshold_cleared
+	var/low_threshold_cleared
 
 /obj/item/organ/proc/Insert(mob/living/carbon/M, special = 0, drop_if_replaced = TRUE)
 	if(!iscarbon(M) || owner == M)
@@ -33,31 +48,53 @@
 	for(var/X in actions)
 		var/datum/action/A = X
 		A.Grant(M)
+	STOP_PROCESSING(SSobj, src)
 
 //Special is for instant replacement like autosurgeons
-/obj/item/organ/proc/Remove(mob/living/carbon/M, special = 0)
+/obj/item/organ/proc/Remove(mob/living/carbon/M, special = FALSE)
 	owner = null
 	if(M)
 		M.internal_organs -= src
 		if(M.internal_organs_slot[slot] == src)
 			M.internal_organs_slot.Remove(slot)
-		if(vital && !special && !(M.status_flags & GODMODE))
+		if((organ_flags & ORGAN_VITAL) && !special && !(M.status_flags & GODMODE))
 			M.death()
 	for(var/X in actions)
 		var/datum/action/A = X
 		A.Remove(M)
+	START_PROCESSING(SSobj, src)
 
 
 /obj/item/organ/proc/on_find(mob/living/finder)
 	return
 
-/obj/item/organ/proc/on_life()
-	return
+/obj/item/organ/process()
+	on_death() //Kinda hate doing it like this, but I really don't want to call process directly.
+
+/obj/item/organ/proc/on_death()	//runs decay when outside of a person
+	if(organ_flags & (ORGAN_SYNTHETIC | ORGAN_FROZEN | ORGAN_NO_SPOIL))
+		return
+	applyOrganDamage(maxHealth * decay_factor)
+
+/obj/item/organ/proc/on_life()	//repair organ damage if the organ is not failing
+	if(!(organ_flags & ORGAN_FAILING))
+		///Damage decrements by a percent of its maxhealth
+		var/healing_amount = -(maxHealth * healing_factor)
+		///Damage decrements again by a percent of its maxhealth, up to a total of 4 extra times depending on the owner's health
+		healing_amount -= owner.satiety > 0 ? 4 * healing_factor * owner.satiety / MAX_SATIETY : 0
+		applyOrganDamage(healing_amount) //to FERMI_TWEAK
+		//Make it so each threshold is stuck.
 
 /obj/item/organ/examine(mob/user)
-	..()
-	if(status == ORGAN_ROBOTIC && crit_fail)
-		to_chat(user, "<span class='warning'>[src] seems to be broken!</span>")
+	. = ..()
+	if(!organ_flags & ORGAN_FAILING)
+		if(status == ORGAN_ROBOTIC)
+			. += "<span class='warning'>[src] seems to be broken!</span>"
+			return
+		. += "<span class='warning'>[src] has decayed for too long, and has turned a sickly color! It doesn't look like it will work anymore!</span>"
+		return
+	if(damage > high_threshold)
+		. += "<span class='warning'>[src] is starting to look discolored.</span>"
 
 
 /obj/item/organ/proc/prepare_eat()
@@ -78,6 +115,10 @@
 	foodtype = RAW | MEAT | GROSS
 
 
+/obj/item/organ/Initialize()
+	. = ..()
+	START_PROCESSING(SSobj, src)
+
 /obj/item/organ/Destroy()
 	if(owner)
 		// The special flag is important, because otherwise mobs can die
@@ -100,13 +141,64 @@
 /obj/item/organ/item_action_slot_check(slot,mob/user)
 	return //so we don't grant the organ's action to mobs who pick up the organ.
 
+///Adjusts an organ's damage by the amount "d", up to a maximum amount, which is by default max damage
+/obj/item/organ/proc/applyOrganDamage(var/d, var/maximum = maxHealth)	//use for damaging effects
+	if(!d) //Micro-optimization.
+		return
+	if(maximum < damage)
+		return
+	damage = CLAMP(damage + d, 0, maximum)
+	var/mess = check_damage_thresholds(owner)
+	prev_damage = damage
+	if(mess && owner)
+		to_chat(owner, mess)
+
+///SETS an organ's damage to the amount "d", and in doing so clears or sets the failing flag, good for when you have an effect that should fix an organ if broken
+/obj/item/organ/proc/setOrganDamage(var/d)	//use mostly for admin heals
+	applyOrganDamage(d - damage)
+
+/** check_damage_thresholds
+  * input: M (a mob, the owner of the organ we call the proc on)
+  * output: returns a message should get displayed.
+  * description: By checking our current damage against our previous damage, we can decide whether we've passed an organ threshold.
+  *				 If we have, send the corresponding threshold message to the owner, if such a message exists.
+  */
+/obj/item/organ/proc/check_damage_thresholds(var/M)
+	if(damage == prev_damage)
+		return
+	var/delta = damage - prev_damage
+	if(delta > 0)
+		if(damage >= maxHealth)
+			organ_flags |= ORGAN_FAILING
+			return now_failing
+		if(damage > high_threshold && prev_damage <= high_threshold)
+			return high_threshold_passed
+		if(damage > low_threshold && prev_damage <= low_threshold)
+			return low_threshold_passed
+	else
+		organ_flags &= ~ORGAN_FAILING
+		if(prev_damage > low_threshold && damage <= low_threshold)
+			return low_threshold_cleared
+		if(prev_damage > high_threshold && damage <= high_threshold)
+			return high_threshold_cleared
+		if(prev_damage == maxHealth)
+			return now_fixed
+
+//Runs some code on the organ when damage is taken/healed
+/obj/item/organ/proc/onDamage(var/d, var/maximum = maxHealth)
+	return
+
+//Runs some code on the organ when damage is taken/healed
+/obj/item/organ/proc/onSetDamage(var/d, var/maximum = maxHealth)
+	return
+
 //Looking for brains?
 //Try code/modules/mob/living/carbon/brain/brain_item.dm
 
 /mob/living/proc/regenerate_organs()
 	return 0
 
-/mob/living/carbon/regenerate_organs()
+/mob/living/carbon/regenerate_organs(only_one = FALSE)
 	var/breathes = TRUE
 	var/blooded = TRUE
 	if(dna && dna.species)
@@ -125,6 +217,8 @@
 			else
 				LI = new()
 			LI.Insert(src)
+			if(only_one)
+				return TRUE
 
 		if(has_stomach && !getorganslot(ORGAN_SLOT_STOMACH))
 			var/obj/item/organ/stomach/S
@@ -134,14 +228,20 @@
 			else
 				S = new()
 			S.Insert(src)
+			if(only_one)
+				return TRUE
 
 	if(breathes && !getorganslot(ORGAN_SLOT_LUNGS))
 		var/obj/item/organ/lungs/L = new()
 		L.Insert(src)
+		if(only_one)
+			return TRUE
 
 	if(blooded && !getorganslot(ORGAN_SLOT_HEART))
 		var/obj/item/organ/heart/H = new()
 		H.Insert(src)
+		if(only_one)
+			return TRUE
 
 	if(!getorganslot(ORGAN_SLOT_TONGUE))
 		var/obj/item/organ/tongue/T
@@ -153,7 +253,10 @@
 
 		// if they have no mutant tongues, give them a regular one
 		T.Insert(src)
-	else
+		if(only_one)
+			return TRUE
+
+	else if (!only_one)
 		var/obj/item/organ/tongue/oT = getorganslot(ORGAN_SLOT_TONGUE)
 		if(oT.name == "fluffy tongue")
 			var/obj/item/organ/tongue/T
@@ -174,6 +277,8 @@
 		else
 			E = new()
 		E.Insert(src)
+		if(only_one)
+			return TRUE
 
 	if(!getorganslot(ORGAN_SLOT_EARS))
 		var/obj/item/organ/ears/ears
@@ -183,9 +288,13 @@
 			ears = new
 
 		ears.Insert(src)
+		if(only_one)
+			return TRUE
 
 	if(!getorganslot(ORGAN_SLOT_TAIL))
 		var/obj/item/organ/tail/tail
 		if(dna && dna.species && dna.species.mutanttail)
 			tail = new dna.species.mutanttail
 			tail.Insert(src)
+			if(only_one)
+				return TRUE

code/modules/surgery/organs/stomach.dm

@@ -8,12 +8,41 @@
 	desc = "Onaka ga suite imasu."
 	var/disgust_metabolism = 1
 
-/obj/item/organ/stomach/on_life()
-	var/mob/living/carbon/human/H = owner
+	healing_factor = STANDARD_ORGAN_HEALING
+	decay_factor = STANDARD_ORGAN_DECAY
 
-	if(istype(H))
-		H.dna.species.handle_digestion(H)
+	low_threshold_passed = "<span class='info'>Your stomach flashes with pain before subsiding. Food doesn't seem like a good idea right now.</span>"
+	high_threshold_passed = "<span class='warning'>Your stomach flares up with constant pain- you can hardly stomach the idea of food right now!</span>"
+	high_threshold_cleared = "<span class='info'>The pain in your stomach dies down for now, but food still seems unappealing.</span>"
+	low_threshold_cleared = "<span class='info'>The last bouts of pain in your stomach have died out.</span>"
+
+/obj/item/organ/stomach/on_life()
+	var/datum/reagent/consumable/nutriment/Nutri
+	if(ishuman(owner))
+		var/mob/living/carbon/human/H = owner
+		if(!(organ_flags & ORGAN_FAILING))
+			H.dna.species.handle_digestion(H)
 		handle_disgust(H)
+		Nutri = locate(/datum/reagent/consumable/nutriment) in H.reagents.reagent_list
+
+		if(Nutri)
+			if(prob((damage/40) * Nutri.volume * Nutri.volume))
+				H.vomit(damage)
+				to_chat(H, "<span class='warning'>Your stomach reels in pain as you're incapable of holding down all that food!</span>")
+
+		else if(Nutri && damage > high_threshold)
+			if(prob((damage/10) * Nutri.volume * Nutri.volume))
+				H.vomit(damage)
+				to_chat(H, "<span class='warning'>Your stomach reels in pain as you're incapable of holding down all that food!</span>")
+
+
+	else if(iscarbon(owner))
+		var/mob/living/carbon/C = owner
+		Nutri = locate(/datum/reagent/consumable/nutriment) in C.reagents.reagent_list
+
+	if(damage < low_threshold)
+		return
+
 
 /obj/item/organ/stomach/proc/handle_disgust(mob/living/carbon/human/H)
 	if(H.disgust)

code/modules/surgery/organs/tongue.dm

@@ -10,8 +10,7 @@
 	var/list/languages_possible
 	var/say_mod = null
 	var/taste_sensitivity = 15 // lower is more sensitive.
-	var/maxHealth = TONGUE_MAX_HEALTH
-	var/damage = 0
+	maxHealth = TONGUE_MAX_HEALTH
 	var/modifies_speech = FALSE
 	var/static/list/languages_possible_base = typecacheof(list(
 		/datum/language/common,
@@ -31,27 +30,34 @@
 
 /obj/item/organ/tongue/proc/handle_speech(datum/source, list/speech_args)
 
-/obj/item/organ/tongue/proc/adjustTongueLoss(mob/living/carbon/M, damage_mod)
-	if (maxHealth == "alien")
-		return
-	if (maxHealth == "bone")
-		var/target = M.get_bodypart(BODY_ZONE_HEAD)
-		M.apply_damage(damage_mod, BURN, target)
-		to_chat(M, "<span class='userdanger'>The drink burns your skull! Oof, your bones!</span>")
-		return
-	if(damage+damage_mod < 0)
-		damage = 0
+/obj/item/organ/tongue/emp_act(severity)
+	. = ..()
+	if(. & EMP_PROTECT_SELF)
 		return
+	if(organ_flags & ORGAN_SYNTHETIC)
+		var/errormessage = list("Runtime in tongue.dm, line 39: Undefined operation \"zapzap ow my tongue\"", "afhsjifksahgjkaslfhashfjsak", "-1.#IND", "Graham's number", "inside you all along", "awaiting at least 1 approving review before merging this taste request")
+		owner.say("The pH is appropriately [pick(errormessage)].")
+
+/obj/item/organ/tongue/applyOrganDamage(var/d, var/maximum = maxHealth)
+
+	if(!d) //Micro-optimization.
+		return
+	if(maximum < damage)
+		return
+	damage = CLAMP(damage + d, 0, maximum)
+	var/mess = check_damage_thresholds(owner)
+	prev_damage = damage
+	if(mess && owner)
+		to_chat(owner, mess)
 
-	damage += damage_mod
 	if ((damage / maxHealth) > 1)
-		to_chat(M, "<span class='userdanger'>Your tongue is singed beyond recognition, and disintegrates!</span>")
+		to_chat(owner, "<span class='userdanger'>Your tongue is singed beyond recognition, and disintegrates!</span>")
 		SSblackbox.record_feedback("tally", "fermi_chem", 1, "Tongues lost to Fermi")
 		qdel(src)
 	else if ((damage / maxHealth) > 0.85)
-		to_chat(M, "<span class='warning'>Your tongue feels like it's about to fall out!.</span>")
+		to_chat(owner, "<span class='warning'>Your tongue feels like it's about to fall out!.</span>")
 	else if ((damage / maxHealth) > 0.5)
-		to_chat(M, "<span class='notice'>Your tongue is really starting to hurt.</span>")
+		to_chat(owner, "<span class='notice'>Your tongue is really starting to hurt.</span>")
 
 
 /obj/item/organ/tongue/Insert(mob/living/carbon/M, special = 0)
@@ -168,7 +174,7 @@
 	icon_state = "tonguexeno"
 	say_mod = "hisses"
 	taste_sensitivity = 10 // LIZARDS ARE ALIENS CONFIRMED
-	maxHealth = "alien" //Their blood is acid, so, no, though a tongueless xeno might be funny
+	maxHealth = 500 //They've a little mouth for a tongue, so it's pretty rhobust
 	modifies_speech = TRUE // not really, they just hiss
 	var/static/list/languages_possible_alien = typecacheof(list(
 		/datum/language/xenocommon,
@@ -189,9 +195,10 @@
 	desc = "Apparently skeletons alter the sounds they produce through oscillation of their teeth, hence their characteristic rattling."
 	icon_state = "tonguebone"
 	say_mod = "rattles"
+	organ_flags = ORGAN_NO_SPOIL
 	attack_verb = list("bitten", "chattered", "chomped", "enamelled", "boned")
 	taste_sensitivity = 101 // skeletons cannot taste anything
-	maxHealth = "bone" //Take brute damage instead
+	maxHealth = 75 //Take brute damage instead
 	modifies_speech = TRUE
 	var/chattering = FALSE
 	var/phomeme_type = "sans"
@@ -201,6 +208,14 @@
 	. = ..()
 	phomeme_type = pick(phomeme_types)
 
+/obj/item/organ/tongue/bone/applyOrganDamage(var/d, var/maximum = maxHealth)
+	if(!owner)
+		return
+	var/target = owner.get_bodypart(BODY_ZONE_HEAD)
+	owner.apply_damage(d, BURN, target)
+	to_chat(owner, "<span class='userdanger'>You feel your skull burning! Oof, your bones!</span>")
+	return
+
 /obj/item/organ/tongue/bone/handle_speech(datum/source, list/speech_args)
 	if (chattering)
 		chatter(speech_args[SPEECH_MESSAGE], phomeme_type, source)
@@ -262,6 +277,7 @@
 	icon_state = "tonguecybernetic"
 	taste_sensitivity = 10
 	maxHealth = 60 //It's robotic!
+	organ_flags = ORGAN_SYNTHETIC
 
 /obj/item/organ/tongue/cybernetic/handle_speech(datum/source, list/speech_args)
 	speech_args[SPEECH_SPANS] |= SPAN_ROBOT
@@ -271,3 +287,4 @@
 	say_mod = "beeps"
 	desc = "A voice synthesizer used by IPCs to smoothly interface with organic lifeforms."
 	electronics_magic = FALSE
+	organ_flags = ORGAN_SYNTHETIC

code/modules/surgery/organs/vocal_cords.dm

@@ -26,12 +26,14 @@
 	zone = BODY_ZONE_HEAD
 	slot = ORGAN_SLOT_ADAMANTINE_RESONATOR
 	icon_state = "adamantine_resonator"
+	decay_factor = 0
 
 /obj/item/organ/vocal_cords/adamantine
 	name = "adamantine vocal cords"
 	desc = "When adamantine resonates, it causes all nearby pieces of adamantine to resonate as well. Adamantine golems use this to broadcast messages to nearby golems."
 	actions_types = list(/datum/action/item_action/organ_action/use/adamantine_vocal_cords)
 	icon_state = "adamantine_cords"
+	decay_factor = 0
 
 /datum/action/item_action/organ_action/use/adamantine_vocal_cords/Trigger()
 	if(!IsAvailable())
@@ -62,6 +64,7 @@
 	var/cooldown_mod = 1
 	var/base_multiplier = 1
 	spans = list("colossus","yell")
+	decay_factor = 0
 
 /datum/action/item_action/organ_action/colossus
 	name = "Voice of God"
@@ -623,10 +626,6 @@
 /datum/action/item_action/organ_action/velvet
 	name = "Velvet chords"
 	var/obj/item/organ/vocal_cords/velvet/cords = null
-	//icon_icon = 'icons/mob/screen_alert.dmi'
-	//button_icon_state = "velvet_chords"
-	//icon = 'icons/mob/screen_alert.dmi'
-	//icon_state = "in_love"
 
 /datum/action/item_action/organ_action/velvet/New()
 	..()
@@ -991,7 +990,7 @@
 			if (HAS_TRAIT(H, TRAIT_DEAF))//How the heck you managed to get here I have no idea, but just in case!
 				speaktrigger += "I can barely hear you! "
 			//And the brain damage. And the brain damage. And the brain damage. And the brain damage. And the brain damage.
-			switch(H.getBrainLoss())
+			switch(H.getOrganLoss(ORGAN_SLOT_BRAIN))
 				if(20 to 40)
 					speaktrigger += "I have a mild head ache, "
 				if(40 to 80)